Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0813 ATGGAATATTTGGGGTATGTGTTTGTAGGAATAGTGACTCTTTTGCTTGTATGCATTCCACATTGGCTTCGCAGTTGGAGGAAGCCCCAGTGCAATGGAAAGCTCCCACCAGGTTCAATGGGATGGCCAATTCTTGGAGAGACCCTTCAGTTTTCGACTCCTTATACTAACCGCGGTGTCTCGCCTTTCATCAGAAAGAGAATGGACAGGTATGGGCCATTGTTCCGGACAAAACTGCTGGGGTGGCCATTTGTTATTTCAGCTGATCCAGACGTGAGCCGCTTCGTCCTCCAACAAGAAGGGAAATTGTTTCACTGCTGGTACATGGAAAGCTTTGACAATCTCTTCGGCCCACAGAATGTGCTTTCATCACAAGGGGCTCTGCACAAGTGCTTAAGAAGCCTGATTTTGAGTCAATTTGGGTCCGAAAGCCTAAGAACTAGGGTTCTTTCTCAAGTTGAAGAGTTGGTGCTGAAAAAACTGCAGTTGTGGTCCAACCATACCTCTGTGGATCTGAAAGAGGGCATTACTTCGATGATGTTTGATTTTACCGCTAAAATGATTTGCAATTACGATGAGTCGAAGACACCAGAGAAGCTGAGAGAGAACTATTCTGCTTTTCTCAGTGGTTTGATCTCCTTCCCTCTGAACATTCCTGGAACTTCTTACTGGAAATGCCTAAAGGGTCGTGAAAGGGCAAGGAAAACACTAAGGAATAGGTTGCTTGAGAGGCTAGCATCCCCGGAAAGGGAGCACAAGGATATCATGGATTTTATTATACAGGAAATGAAGAAGGATGACACTATCCTAACTGAGGAAATCGCTGTGGATTTACTCTTTGGGCTTCCTTTTGGTGCTAATGAAACCACTTCCTCTACTCTTATATTAGCCGTTCAATATCTTGGTAGTCATCCTTCGGCATTAGCAGAGATAACAAGAGAGCATGAGTCGATTCTAAGGAACCGAAAACAAAAGGACTCTGGAATCACATGGGAAGAGTATAAATCCATGAGCTTTACCATGATGGTTGTCAATGAAACTGTTAGGATGGGAAGTATTCTCCCTTCAATTTTCAGGAAAGTGGACAAAGATATTGAAATAAAGGGGTACACGATTCCAGCTGGGTGGATGGTTCTGGTCTCTCCTCCAGCAGCCCATTTCAACCCCAATGTACACAAGGATCCCCATGTCTTCAACCCATGGCGATGGCAGGGTCAAGAACCGACTTCAGGTTCGAATGCTTTGATGGGTTTTGGTGGAGGAATCAAACTTTGTGCGGGAGTTGACTTTGCCAAACTTGAAATCGCCATTTTCCTACACCATCTGGTCACAAAATACAGGTGGGAGGTGATCAAGGGAGGAGAAGTTGTTTGGCGGCAGTCAACTGGACCCATTTTTCCAAACGGTTTTCACGTTCGAATATCTGAGAAAACTAAGTGA 1440 0.4479 MEYLGYVFVGIVTLLLVCIPHWLRSWRKPQCNGKLPPGSMGWPILGETLQFSTPYTNRGVSPFIRKRMDRYGPLFRTKLLGWPFVISADPDVSRFVLQQEGKLFHCWYMESFDNLFGPQNVLSSQGALHKCLRSLILSQFGSESLRTRVLSQVEELVLKKLQLWSNHTSVDLKEGITSMMFDFTAKMICNYDESKTPEKLRENYSAFLSGLISFPLNIPGTSYWKCLKGRERARKTLRNRLLERLASPEREHKDIMDFIIQEMKKDDTILTEEIAVDLLFGLPFGANETTSSTLILAVQYLGSHPSALAEITREHESILRNRKQKDSGITWEEYKSMSFTMMVVNETVRMGSILPSIFRKVDKDIEIKGYTIPAGWMVLVSPPAAHFNPNVHKDPHVFNPWRWQGQEPTSGSNALMGFGGGIKLCAGVDFAKLEIAIFLHHLVTKYRWEVIKGGEVVWRQSTGPIFPNGFHVRISEKTK* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0813 479 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 FunFam Cytochrome P450 family protein 27 476 - -
Vvi16g0813 479 CDD CYP90-like 67 476 - -
Vvi16g0813 479 Pfam Cytochrome P450 36 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS E-class P450 group IV signature 409 425 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS E-class P450 group IV signature 337 353 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PRINTS E-class P450 group IV signature 370 384 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 SUPERFAMILY Cytochrome P450 33 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 Gene3D Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0813 479 PANTHER CYTOCHROME P450 26 34 452 - -
Vvi16g0813 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0813 Vvi-Chr16 16096085 16099561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0813 12 477 Cytochrome P450 AT1G12740 51.483 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0813 - - vvi:100258933 985.711