Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0812 ATGGGATATCTGTGGTATGCTTTTGCTTTCACAGCGACCTTACTTGTATGTATTACACATTGGGTTTACAGTTTTAGGAAGCCCAAGTTCAATGGAAAGCTCCCTCCGGGTTCAATGGGCTTGCCAATTCTCGGAGAGACTCTTCAGTTCTTTGCTCCCAATACCGCTCTAGATGTCGCACCTTTCATCAGAGAGAGAATGAACAGGTACGGGCCATTGTTCCGAACAAGTCTGGTGGGCTGGCCACTTGTTATTTCCACTGACCCAGACCTCAGCCGCTTCATCCTCCAACAGGAGGGGAAGCTGGTTCACAGCTGGTACACAGAAAGTTTTGACAATGTGGTAGGCAAGCAGAATGTGCTTTCAGCTAAAGGGGCTATGCACAAGTGCCTCAGAAACTTGATTTTGAATCAATTTGGCTCTGAAAGCCTAAAAACAAGGTTTCTTACTCAAGTTGAAGAGTTGGTGCTGAAACATCTGCAGTTGTGGTCTAACTGTACCTCTGTGGAGTTGAAAGAAGCCATTGCTTCTATGATATTTGGGTTTACTGCTAAAAAGCTGTTTGACTATGATGAGTCAAGGACCCCAGAGAAGCTGAGAGAGAACTACGCTGCTTTTCTCGATGGTTTGATCTCATTCCCTCTGAAAATCCCTGGAACTTCTTATTGGAAATGTCTACAGGGTCGTAAAAGGGCAATGAAAACAATAAGAAATATGTTGGATGAGAGGCGTGCATCACCTGAAAGGGAAGACAAAGATTACATTGATTTTGTCCTAGAAGAGATGCAGAAGGATCAAACCATCCTAACCGAGGAAATCGTTTTGGATTTACTCTTTGCACTTCCTTTTGCTACTTATGAAACCACTTCCTCGGCTCTTGTATTAGCCATTCAGTATCTTGGTAGCCATCCTTCAGCATTAGCAGAGATAACAAAAGAGCACGAGTCAATTCTAAGGAGCAGAGAAAGAGTGGATTCTGGAATCACATGGAATGAGTATAAATCCATGAATTTCACGATGATGGTTATCAATGAAACTGTTAGACTTGGAAATATCGTCCCTGGAATTTTCAGGAAAGTGGCAAAAGACATTGAAATAAAGGGGTATACAATTCCAGCAGGGTGGATGGTTATGATCTCCCCTCCAGCTGTCCATTTCAACCCCACTCTGTACAAGGACCCCCTTGTCTTCAATCCATGGCGATGGCAGTGCCAAGAACCAAATGCAGGGTCAAGAAATTTCATGGGCTTTGGTGGAGGAATAAGACAATGTGTGGGAGCTGAGTTTGTGAAACTTCAAATGGCCATTTTTCTCCACCATCTGCTTACAAAATACAGGTGGACAGTGATCAAGGGAGGAGACACCGTTTGGAAGCCAGGACTTGTGTTTCCAAAAGGTTTTCACGTTCAAATATCTGAGAGAACCAAGTTGTATGAAGATAGTCCCATGGAAACATAA 1458 0.4348 MGYLWYAFAFTATLLVCITHWVYSFRKPKFNGKLPPGSMGLPILGETLQFFAPNTALDVAPFIRERMNRYGPLFRTSLVGWPLVISTDPDLSRFILQQEGKLVHSWYTESFDNVVGKQNVLSAKGAMHKCLRNLILNQFGSESLKTRFLTQVEELVLKHLQLWSNCTSVELKEAIASMIFGFTAKKLFDYDESRTPEKLRENYAAFLDGLISFPLKIPGTSYWKCLQGRKRAMKTIRNMLDERRASPEREDKDYIDFVLEEMQKDQTILTEEIVLDLLFALPFATYETTSSALVLAIQYLGSHPSALAEITKEHESILRSRERVDSGITWNEYKSMNFTMMVINETVRLGNIVPGIFRKVAKDIEIKGYTIPAGWMVMISPPAVHFNPTLYKDPLVFNPWRWQCQEPNAGSRNFMGFGGGIRQCVGAEFVKLQMAIFLHHLLTKYRWTVIKGGDTVWKPGLVFPKGFHVQISERTKLYEDSPMET* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0812 485 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 SUPERFAMILY Cytochrome P450 31 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 Pfam Cytochrome P450 35 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 Gene3D Cytochrome P450 26 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 CDD CYP90-like 66 473 - -
Vvi16g0812 485 PANTHER CYTOCHROME P450 26 33 451 - -
Vvi16g0812 485 FunFam Cytochrome P450 family protein 26 473 - -
Vvi16g0812 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vvi16g0812 485 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0812 485 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0812 Vvi-Chr16 16088472 16090881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0812 4 474 Cytochrome P450 AT1G12740 56.813 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0812 - - vvi:100253786 993.03