Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0808 ATGGATTCAGACACAGTCACAGCAGATATCAGCCTCTCCTCTTTCGTATACGCTCTTCTTCTGCTACCATTTTTGCTCATTCTCAAGCATATTTTCTTGAAACCTCCACCACTTCCACCGGGTCCATATCCATGGCCTATCATCGGAAACCTCCTCCAACTGGGGAAGAACCCTCATGTCAAACTCGCCAGCCTCGCCAAACTCCATGGCCCACTCATGTCTCTACGCCTCGGTACACAGCTGATGGTGGTGGCATCCTCGCCTGCAGCAGCACTTGAAGTACTCAAGACCCATGACCGGACACTCTCTGGCCGGTACGTAAGTAGTTCACTATCAGTCAAGGACCCTAAACTTAACCATTTGTCACTAGCGTTTGCCAAGGAGTGCACCAACAACTGGAAGAATCTAAGAACCATTTGCCGGACGGAGATGTTTTCAGGCAAAGCAATGGAGTCTCATGTGGAGTTGAGGGAGAGGAAGGTGATGGAGTTGGTGGAGTTTTTGGCAACAAAGGAAGGTGAAGTGGTCAAGGTTATGGATCTAGTGTTTACTACTATTTGTAATATACTGAGCAATACGTTTTTTTCAATGGACCTTTGTGATTTTGAGCGTGAGGGTTTGAAGGATTTCATCTATAGAGCTGCAGAGTTGGGGGCTACTCCAAATCTATCAGACTTTTATCCTATATTGGACGGATTGAATCTGCACGGTTCTAAGAAGAAATCCAAGGAGGCGCTGGGGAGGATTCTCGCTACTTGGGAGGGGACTCTCAAAGAAAGAAGGAAGCAAAAGAATCCTGGTTCCAGCCATCGAGACCTCTTGGAGGCTTTTTTAGAAATTAGGTTTGAAGATGATCAGATCAACCAAGTGATTCTGGAGCTCTTCAGTGCCGGGGCAGACACTAGCACATTGACAATAGAATGGGCAATTACACAGCTGATTAGAAACCCAGATGTCATGTATAAACTTCGAGATGAACTCACAAAAATAATCGGTGAATCTCCAGTAAGAGAGTCCCATTTGCCTCATCTGCCCTATCTCCAAGCCTGTGTGAAAGAGACCCTGAGATTGCATCCTCCAGCACCACTACTCCTTCCTCACCGAGCCATGGAGACATGCCAAGTCATGGGCTACACAATTCCAAAAGACTCCCAAGTATTTGTGAACATTTGGGCTATGGGGAGAGACCCCAAGGTTTGGGATGACCCATTGAGCTTCACACCAGAAAGGTTTCTGGATTCAAAGTTGGAATTCAAGGGAAATGATTTCGAATATATACCATTTGGGGCAGGGAGGAGAATCTGTCCAGGAATGGCTTTGGGTGCTAGGCAAGTTCCCTTGGTTCTTGCAACGTTGGTCCACTTGTTTGATTGGTCTCTTCCGGACAATATGGACTCCGCCCAAATAGACATGGAGGAGTGGTTGGTTATTACATTGAGGAAGGAAAATCCACTGCGCCTTGTTCCTAAGGTTAGAAAATAA 1482 0.4642 MDSDTVTADISLSSFVYALLLLPFLLILKHIFLKPPPLPPGPYPWPIIGNLLQLGKNPHVKLASLAKLHGPLMSLRLGTQLMVVASSPAAALEVLKTHDRTLSGRYVSSSLSVKDPKLNHLSLAFAKECTNNWKNLRTICRTEMFSGKAMESHVELRERKVMELVEFLATKEGEVVKVMDLVFTTICNILSNTFFSMDLCDFEREGLKDFIYRAAELGATPNLSDFYPILDGLNLHGSKKKSKEALGRILATWEGTLKERRKQKNPGSSHRDLLEAFLEIRFEDDQINQVILELFSAGADTSTLTIEWAITQLIRNPDVMYKLRDELTKIIGESPVRESHLPHLPYLQACVKETLRLHPPAPLLLPHRAMETCQVMGYTIPKDSQVFVNIWAMGRDPKVWDDPLSFTPERFLDSKLEFKGNDFEYIPFGAGRRICPGMALGARQVPLVLATLVHLFDWSLPDNMDSAQIDMEEWLVITLRKENPLRLVPKVRK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0808 493 FunFam Cytochrome P450 76C4 33 488 - -
Vvi16g0808 493 Pfam Cytochrome P450 39 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 Gene3D Cytochrome P450 33 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 19 490 - -
Vvi16g0808 493 SUPERFAMILY Cytochrome P450 39 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0808 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0808 Vvi-Chr16 16044657 16046231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0808 38 489 Cytochrome P450 AT2G45550 41.365 2.38e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0808 - - vvi:100245281 922.924