Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0807 ATGGATCCAGACACGGTCACAGCAGATATCAGTATCTTCTCCTTCTTGTACGCTCTTCTTTTGCTACCATTTTTGGTCATCCTCAAGCACATTTTCCTCAAACCTCCACCACTTCCACCAGGTCCATATCCATGGCCTATTATCGGAAACCTCCTTCAAATGGGGAAGAACCCTCATGCCAAACTAGCCAACCTCGCCAAACTCCATGGCCCACTCATGTCCCTCCGCCTCGGTACACAACTGATGGTGGTGGCGTCCTCGCCTGCAGCAGCAATGGAAGTACTCAAGACCCATGACCGGGCCCTCTCTGGCCGGTACCTCAGTAGCTCAGTTCCAGTGAAGAACCCTAAACTCAACCATTTGTCAATAGTGTTTGCCAAGGACTGCAATACAAACTGGAAGAATTTGAGAGCTATTTGCCGGATGGAGCTGTTTTCGGGCAAAGCAATGGAGTCTCAGGTGGAGTTGAGGGAGAGGAAGGTGACGGAGTTGGTGGAGTTTTTGGCAACAAAGGAAGGTGAAGTAGTGAAGGTTATGGATCTAGTGTTTACTACTATTTGTAATATACTAAGCAATAAATTTTTCTCAATGGATCTTTGCGATTTTGAGGATGAGGGTAGAGTTGGGGGAGCATTGAAGGATCTCATACATAAGAATGCAGAATTCGGCGCTACTCCAAATTTATCAGATTATTATCCTATATTGGGTGGATTGGATATCCAGGGTATTAACAGGAAAGCCAAGGAGATGTTTGAGAGGATTCCCACTACTTGGGAGGACATTCTCAAAGAAAGAAGAACGCAAAGGAGTAATAGATCCAGCCATCGAGACTTCTTGGAGGCTCTGTTAGAAATTGGGTTTGAAGATGATCAGATCAACCAAGTGATTCTGGAGCTGTTCAGTGCTGGGGCAGAAACTAGTAGTTTGACGGTAGAATGGGCAATGGCAGAACTGATAAGAAACCAAGACGCCATGGATAAACTCCGCGGAGAACTCAGACAAATAGTCGGTGAATCTCCAGTAAGAGAATCCCATTTGCCTCGTCTGCCCTATCTCCAAGCCTGTGTGAAAGAGGCACTGAGATTACACCCTCCAGCACCACTACTCCTTCCTCACCTTGCCGCGGAAACATGCCAAGTCATGGGCTACACAATTCCGAAAGACTCGCAAATATTTGTGAACATTTGGGCGATGGCGAGAGACCCCAAGATTTGGGATGACCCATTGAGCTTTAAACCAGAAAGGTTTCTGGATTCAAAGTTGGACTTCAAGGGAAATGATTTCGAGTATATACCATTTGGCGCAGGAAGGAGAATATGCCCAGGATTGGCTTTGGGTGGTAGGCAAGTTCCCCTGATCCTAGCGACGTTTGTCCACTTATTTGGTTGGTCCCTTCCGGGCAACATGGACTCTGCCCAGCTAGACATGGAGGAATGGTTGGTTATTACATTGAGGAAGGAACAGCCGCTACGCCTTGTTCCTAGGGTTAGAAAATAG 1497 0.4683 MDPDTVTADISIFSFLYALLLLPFLVILKHIFLKPPPLPPGPYPWPIIGNLLQMGKNPHAKLANLAKLHGPLMSLRLGTQLMVVASSPAAAMEVLKTHDRALSGRYLSSSVPVKNPKLNHLSIVFAKDCNTNWKNLRAICRMELFSGKAMESQVELRERKVTELVEFLATKEGEVVKVMDLVFTTICNILSNKFFSMDLCDFEDEGRVGGALKDLIHKNAEFGATPNLSDYYPILGGLDIQGINRKAKEMFERIPTTWEDILKERRTQRSNRSSHRDFLEALLEIGFEDDQINQVILELFSAGAETSSLTVEWAMAELIRNQDAMDKLRGELRQIVGESPVRESHLPRLPYLQACVKEALRLHPPAPLLLPHLAAETCQVMGYTIPKDSQIFVNIWAMARDPKIWDDPLSFKPERFLDSKLDFKGNDFEYIPFGAGRRICPGLALGGRQVPLILATFVHLFGWSLPGNMDSAQLDMEEWLVITLRKEQPLRLVPRVRK* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0807 498 Pfam Cytochrome P450 39 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vvi16g0807 498 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 FunFam Cytochrome P450 76C4 33 493 - -
Vvi16g0807 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 19 495 - -
Vvi16g0807 498 SUPERFAMILY Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0807 498 Gene3D Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0807 Vvi-Chr16 16039082 16040675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0807 12 494 Cytochrome P450 AT2G45550 40.161 2.48e-126 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0807 - - vvi:100267583 951.814