Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0806 ATGGCTACATACACAATCATAGCAGATATCAGCCTCTTCTCCTTTTTGTACCCTCTTCTTCTGCTACCATTTTTGCTCATTTTCAAGCATATTTTCCTCAAATCTCCACCACTTCCACCAGGTCCATATCCATGGCCCATCATAGGAAACCTCCTCCAAATGGGGGGGAACCTTCATGTCAAACTTGCTAATCTCGCCAAACGCCATGGCCCACTCATGTCTCTCCGCCTCGGTACACAAATCATGGTGGTCGCATCGTCGTCTGCAGCAGCCATGGAAGTACTCAAGACCCATGACCGGACGCTCTCCGGCCGCTATGTCAGTACCACAATTCCAGTTAACAGCCCTAAGCTCAACCATTTGGCAATGGCGTTTGCCAAGGTCTGTAACAGCGACTGGAGGAATCTGAAAGCTATCTGCCGGATGGAGCTGTTTTCAGGCAAAGCAATGGAGTCTCGTGTGGAGTTGAGGGAGAGGAAGGTGATGGAATTGGTGGAGTTTTTGGAAAAAAAGGAAGGTGAAGTGGTGAAGGTTATGGATCTAGTGTATACTACTGTCTGTAATATACTTAGCAATAAGTTTTTTTCAATAGATTTTTCTGATTTTGAGGGTAGGGATGTCCGTGGAGTACTGTTGAAGGATCTCCTAAATGAAAATGCAGAGTTGGGGGCTACAAATATATTAGACTTCTATCCTATATTGGGTGGATTGGATATTCAGGGCATTCGGAAGAAATTGAAGGAGATCTTTAGGAGGATTCCCACTACTTGGGAGGACATTCTCAAAGAAAGAAGAAAGCAAAGGATTCATGGTTCCAGCCATGGAGACTTCTTGGATGCTTTGTTAGAAACTGGGTTTGAAGATGATCAGATCAACCATGTGATTATGGAGCTGTTCTTTGCTGGGCCAGAAACTAGTAGCTTGACAGTAGAATGGGCAATGGCGGAACTGATTAAAAATCAAGATGCCATGCATAAACTTTGCAACGAACTCACACAAATCATTGGTGAATCTCCAGTAAGAGAGTCCCATTTGCCTCATCTGCCCTATCTCCAAGCCTGTGTGAAAGAGACACTGAGATTGCACCCTACAGGACCACTGCTTCTTCCTCACCGAGCCACGGAGACATGCCAAATCATGGGCTACACAATTCCAAAGGACTCCATAATATTTGTGAACATGTGGGCAATGGGGAGAGACCCCGGGACTTGGGAGGATCCATTGAGCTTCAAACCAGAAAGGTTTCTGGATTCAAAGTTGGAATTCAAGGGAAACGATTTCGAGTATATACCATTCGGTGCAGGCAGGAGAATGTGTCCAGGAATGCCTCTGGCTGCTAGGCTAGTTCCCATGATTCTGGCAACGTTTGTCCGCCTGTTTGATTGGTCTACTCCGGGCGACATGGACTTTGCCGAGATTGACATGGAGGAGCGGTTTGTTATAACATTGAGGAAGGAACAACCACTGCGTCTTGTTCCTAGGATTAGAAAATATTAG 1497 0.4569 MATYTIIADISLFSFLYPLLLLPFLLIFKHIFLKSPPLPPGPYPWPIIGNLLQMGGNLHVKLANLAKRHGPLMSLRLGTQIMVVASSSAAAMEVLKTHDRTLSGRYVSTTIPVNSPKLNHLAMAFAKVCNSDWRNLKAICRMELFSGKAMESRVELRERKVMELVEFLEKKEGEVVKVMDLVYTTVCNILSNKFFSIDFSDFEGRDVRGVLLKDLLNENAELGATNILDFYPILGGLDIQGIRKKLKEIFRRIPTTWEDILKERRKQRIHGSSHGDFLDALLETGFEDDQINHVIMELFFAGPETSSLTVEWAMAELIKNQDAMHKLCNELTQIIGESPVRESHLPHLPYLQACVKETLRLHPTGPLLLPHRATETCQIMGYTIPKDSIIFVNMWAMGRDPGTWEDPLSFKPERFLDSKLEFKGNDFEYIPFGAGRRMCPGMPLAARLVPMILATFVRLFDWSTPGDMDFAEIDMEERFVITLRKEQPLRLVPRIRKY* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0806 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 19 494 - -
Vvi16g0806 498 Pfam Cytochrome P450 39 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 CDD CYP76-like 66 493 - -
Vvi16g0806 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vvi16g0806 498 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0806 498 FunFam Cytochrome P450 76C4 32 492 - -
Vvi16g0806 498 SUPERFAMILY Cytochrome P450 39 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0806 Vvi-Chr16 16028879 16030465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0806 12 493 Cytochrome P450 AT2G45550 37.500 4.91e-117 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0806 - - vvi:100262428 958.362