Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0791 ATGGAGGAATCTGGTGCCGAGGTAATAAATGGGTACCAGAGATTCAGAGCCGCGCAAAACTACGTACTCGAATGTGGCTCGGCACGTACGACACCTGAAATGGCGGCTGCCGCATTTGATGTACCGTTGCTAGCCTTAAAAGGCATTAATGCCAACTTGAATTTTCCCAACTCCGCACTGTCATTCCATAAACCAAAGTCCACCTCCGCCGGTGATATACGGGCAGCTGTAGTGAGCACCGCCAAGGCCCAGCAAGCGAAGTCCAAGAACTTGGAGAGTCCAGACCCCATCCAACCTAAAAAGGAGAAGACGACACAACTCGGTGGCTTGGCAGCGGGGGAGGATCAATTCATTGAGGAGGAGGAGCTTCTGAGCATGCCTAATTTACTGGTAGACAAGGCCGAGGGAATGCTGGTTAGCCTCTCCAGACTCAAGTCCCAAACCTTCGACGAGGGAATTTTTATTTTATTTTTTACTTTCCATCTCTTTGCTTAA 495 0.497 MEESGAEVINGYQRFRAAQNYVLECGSARTTPEMAAAAFDVPLLALKGINANLNFPNSALSFHKPKSTSAGDIRAAVVSTAKAQQAKSKNLESPDPIQPKKEKTTQLGGLAAGEDQFIEEEELLSMPNLLVDKAEGMLVSLSRLKSQTFDEGIFILFFTFHLFA* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0791 164 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 30 142 IPR045277 GO:0003700
Vvi16g0791 164 MobiDBLite consensus disorder prediction 84 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0791 Vvi-Chr16 15832474 15832968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0791 32 144 AP2-EREBP Transcription Factor Family AT5G52020 46.491 9.39e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0791 - - vvi:100250412 159.844