Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0766 ATGGACAGGGTCAACCAAAGCAAGAAAAAGGAGGACTTCATTTTACTCAAGACCGAGTGCCAAAGGGTGATTGGAGATGGGGTTTCTACATATTCAATTTTTGGGCTGTTCGATAGACATAATGGATTTGCAGTTGCTATGTACTCAAAAGAGAACCTTCTAAACAATGTTTTAGCCGCTATTCCTCCAGAACTTAGCAAAGATGAGTGGGTAGTTGTCTTACCTAGGACTTCGATTGCAGGGTTTGTTAAGACAGACATGGATTTCCAAGAGGAAGCACGAACTTCAGGAACGACTGTTACCTTTGTTACAATAGAAGGATGGGTGGTAATTGTTGCTTCCATTGGTGATTCACGGTGCATATTTGAATCTGCTGAAGGTGATATATACCATTTGTCAGCAAACCATAGATTTGAATACGATGAAAAGAAAAGAGATTGTGTTGCTGCAAGGGAGGTTCTCATTTTCTAG 471 0.4055 MDRVNQSKKKEDFILLKTECQRVIGDGVSTYSIFGLFDRHNGFAVAMYSKENLLNNVLAAIPPELSKDEWVVVLPRTSIAGFVKTDMDFQEEARTSGTTVTFVTIEGWVVIVASIGDSRCIFESAEGDIYHLSANHRFEYDEKKRDCVAAREVLIF* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0766 156 Gene3D - 2 155 IPR036457 -
Vvi16g0766 156 Pfam Protein phosphatase 2C 12 144 IPR001932 -
Vvi16g0766 156 SUPERFAMILY PP2C-like 5 151 IPR036457 -
Vvi16g0766 156 PANTHER PROTEIN PHOSPHATASE 11 153 IPR015655 GO:0004722|GO:0006470
Vvi16g0766 156 ProSiteProfiles PPM-type phosphatase domain profile. 1 156 IPR001932 -
Vvi16g0766 156 FunFam Uncharacterized protein 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0766 Vvi-Chr16 15463870 15464340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0766 5 150 PP2C-type Phosphatase Gene Family AT1G47380 72.603 1.37e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0766 - - vvi:109124184 314.309