Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0765 ATGGAGGACTTCATTTTACTCAAGACCAAGTGCCAAAGGGTGATTGGAGATGGGGTTTCTACATATTTGGTTTTTGGGTTGTTCGATAGACATAATGGATTTGCAGCTGCTTTGTACTCAAAAGAGAACCTTCTAAACAATGTTTTAGCTGCTATTCCTCCAGAACTTAGCAAAGATGAGTGGGTAGCTGTCTTGCCTAGGACTTTAGTTGCAGGGTTTGTTGAGACAGACATGGACTTCCAAGAGGAAGCACAAACTTCAGGAATAACTATTACCTTTGTAACAATAGAAGGATGGGTGGTAATTATTGCTTCCATTGGTGATTCACGATGGATATTTGAATCCACTGAAGGTGATATATACCATTTGTCAGCAAACCATAGATTTGAATGCGATGAAGAGGAAAGAGATTGTGTCGCTGCAAGGGAGGTTCTCATTGTCTGGAAAAACCATCACCCGGGTTTCTCTCCTTAA 474 0.4093 MEDFILLKTKCQRVIGDGVSTYLVFGLFDRHNGFAAALYSKENLLNNVLAAIPPELSKDEWVAVLPRTLVAGFVETDMDFQEEAQTSGITITFVTIEGWVVIIASIGDSRWIFESTEGDIYHLSANHRFECDEEERDCVAAREVLIVWKNHHPGFSP* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0765 157 ProSiteProfiles PPM-type phosphatase domain profile. 1 157 IPR001932 -
Vvi16g0765 157 PANTHER PROTEIN PHOSPHATASE 2C 1 137 IPR015655 GO:0004722|GO:0006470
Vvi16g0765 157 FunFam Uncharacterized protein 1 154 - -
Vvi16g0765 157 SUPERFAMILY PP2C-like 1 148 IPR036457 -
Vvi16g0765 157 Pfam Protein phosphatase 2C 17 135 IPR001932 -
Vvi16g0765 157 Gene3D - 1 154 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0765 Vvi-Chr16 15445031 15445504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0765 2 141 PP2C-type Phosphatase Gene Family AT1G47380 70.714 6.46e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0765 - - vvi:109124183 323.553