Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0761 ATGGCTCCTACAGTGGTCCCCTTCTCCTCAAGGGGTCCTAACCCTATTACACCAGACATTCTCAAGCCTGATATAACTGCCCCTGATGCAAATATCCTTTCAGCCTGGTCTCCCCTTGCATTCCCTTCCGTCTGGATGTTTGATGATCGGCAAGTGGACTACTACATCATCTCTGGAACATCCATGTCTTGCCCTCATGTTACTGACGCTGCAGCATATAACAAGGCTGCCCATCCAACATGGTCTCCTGCTGCAATCAAGTCTGCTCTCATGACCACAGATTCGATCATGGACCCAAGGAAGAACGAAGATGCAGAATTTGGCTATGGGTCTGGGCACATCAACCCAGTGAAAGCAGTGGACCCTGGGTTAGTCTTTGATGCAAGTGAAGCAGATTATGTGGATTTCCTATGCAAGGTTACAACACCACCCTACTAA 438 0.4863 MAPTVVPFSSRGPNPITPDILKPDITAPDANILSAWSPLAFPSVWMFDDRQVDYYIISGTSMSCPHVTDAAAYNKAAHPTWSPAAIKSALMTTDSIMDPRKNEDAEFGYGSGHINPVKAVDPGLVFDASEADYVDFLCKVTTPPY* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0761 145 Gene3D Peptidase S8/S53 domain 2 133 IPR036852 GO:0004252|GO:0006508
Vvi16g0761 145 SUPERFAMILY Subtilisin-like 3 121 IPR036852 GO:0004252|GO:0006508
Vvi16g0761 145 ProSiteProfiles Serine proteases, subtilase domain profile. 1 120 - -
Vvi16g0761 145 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 140 IPR045051 -
Vvi16g0761 145 Pfam Subtilase family 4 110 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0761 Vvi-Chr16 15378970 15379712 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0761 1 138 Subtilisin-like Serine Gene Family AT5G58830 52.857 4.05e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0761 - - vvi:104882168 305.834