Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0759 ATGGAGGGAGTAGTTTCAGTGTTTCCCAACACCAAAGTGCAACTTCACACTACAAGATCATGGGATTTTATGAGCTTTCCAGAACCCCCTATGGGGTCTTATGAAGGAGATGTTATCATTGGAATGCTAGACACAGGAATTTGGCCGGAGAGCGTGAGTTTCAGGGATGAAGGATTTGGTCCCCCACCTGCAAAATGGAAAGGGATATGCCAGACAGAAAATAACTTCACCTGCAACAACAAGATCATAGGAGCGCGCTTCTATGATACTGACAATTTGGCCGACCCTCTCCGTGATACCAAATCACCAAGGGACACATTGGGACATGGGAGTCACACTGCCTCAACTGCAGCAGGGAGAGCAGTGGAAAACGCAAGCTACTACGGGATAGCCAGCGGTATTGCAAGAGGCGGAGTTCCAAATGCAAGGCTGGCCGTGTATAAAGTATGCTGGGGAGGAGGTTGCAGCCCTGCAGACATTCTAGCTGCTTTTGATGATGCAATAGCCGATGGAGTCGACATTTTATCAATTTCCCTGGGTTCTGAAATGCCAGCCGCATACAACAAGGAACCAGTGGCTATTGGGTCTTTCCATGCCATGAAAAATGGAATTTTGACCTCTTGTTCTGCAGGAAATAAGGGGCCATATCGGAGACAAATTTCAAACTATGCCCCTTGGGCTTTAACAGTGGCTGCTAGCACCATTGACAGGAGTTTTGTTACCAAAGTGGTGCTTGGCAATGGACAAACAATTCTTGGAACTTCGCTCAATAATTTCCATCTGGATGGCACTTCATTCCCCTTGGTGTACTCGGGAGATGCAGCAAATATAACCTCAGCTATGAGCCCAAACATCGCAGGCATCTGCTTCCCAGGAACTCTAAGCACACTCAAAACCAGAGGAGCAGTTGTCCTCTGCAATATCCTCTCTGATAGTTCGGGTGCCTTTTCTGCTGAGGCTGTAGGCCTCATAATGGCCTCACCATTTGATGAAATAGCCTTTGCGTTCCCTGTACCAGCAGTGGTGATCAGCTATGATGACCGATTGAAGCTAATTGACTACATCAGAACGACAGAATATCCTACTGCAACTATTCTTTCTACTGAGACAACGACAGATGTCATGGCTCCAACAGTTGTCTCCTTCTCCTCAAGAGGTCCTAACCCTATTAGTCCAGATATTCTCAAGCCTGATGTAACTGCCCCTGGTTCAAACATTCTTGCGGCCTGGTCTCCCCGTGGACTCTCTTCAGTCTGGGTGTTCGATGATAGGCAAGTTGACTACTACATCATCTCCGGCACATCCATGTCTTGCCCTCATGTCACTGGTGCTGCAGCATATATCAAGGCCGCCCACCCAACATGGTCTCCTGCTGCTATCAAGTCTGCCCTCATGACTACAGGTGACTAA 1410 0.4794 MEGVVSVFPNTKVQLHTTRSWDFMSFPEPPMGSYEGDVIIGMLDTGIWPESVSFRDEGFGPPPAKWKGICQTENNFTCNNKIIGARFYDTDNLADPLRDTKSPRDTLGHGSHTASTAAGRAVENASYYGIASGIARGGVPNARLAVYKVCWGGGCSPADILAAFDDAIADGVDILSISLGSEMPAAYNKEPVAIGSFHAMKNGILTSCSAGNKGPYRRQISNYAPWALTVAASTIDRSFVTKVVLGNGQTILGTSLNNFHLDGTSFPLVYSGDAANITSAMSPNIAGICFPGTLSTLKTRGAVVLCNILSDSSGAFSAEAVGLIMASPFDEIAFAFPVPAVVISYDDRLKLIDYIRTTEYPTATILSTETTTDVMAPTVVSFSSRGPNPISPDILKPDVTAPGSNILAAWSPRGLSSVWVFDDRQVDYYIISGTSMSCPHVTGAAAYIKAAHPTWSPAAIKSALMTTGD* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0759 469 SUPERFAMILY Subtilisin-like 27 468 IPR036852 GO:0004252|GO:0006508
Vvi16g0759 469 Gene3D - 236 372 - -
Vvi16g0759 469 Gene3D Peptidase S8/S53 domain 37 468 IPR036852 GO:0004252|GO:0006508
Vvi16g0759 469 ProSiteProfiles Serine proteases, subtilase domain profile. 20 469 - -
Vvi16g0759 469 FunFam Subtilisin-like protease SBT1.5 37 248 - -
Vvi16g0759 469 PRINTS Subtilisin serine protease family (S8) signature 35 54 IPR015500 -
Vvi16g0759 469 PRINTS Subtilisin serine protease family (S8) signature 432 448 IPR015500 -
Vvi16g0759 469 PRINTS Subtilisin serine protease family (S8) signature 105 118 IPR015500 -
Vvi16g0759 469 CDD Peptidases_S8_3 13 467 IPR034197 -
Vvi16g0759 469 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 467 IPR045051 -
Vvi16g0759 469 ProSitePatterns Serine proteases, subtilase family, serine active site. 433 443 IPR023828 -
Vvi16g0759 469 CDD PA_subtilisin_like 243 365 - -
Vvi16g0759 469 Pfam Subtilase family 37 467 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0759 Vvi-Chr16 15357230 15359385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0759 2 467 Subtilisin-like Serine Gene Family AT5G59090 51.702 1.98e-163 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0759 - - vvi:100267263 937.947