LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi16g0756	ATGGACGGAGTGGTTTCAGTTGTTCCAAACAGCATGCTAGAGCTTCACACAACAAGATCATGGGACTTCATGGGATTTACTCAATCCCATGTTAGAGATTCCCTAGGAGGAGATGTGATTATTGGGCTGCTAGATACAGGAATTTGGCCAGAATCCGAGAGCTTCAGCGATGAAGGATTTGGCCCTCCACCTGCAAAATGGAAAGGAATGTGCCAAACTGAGAATAACTTCACCTGCAACAACAAGATCATTGGAGCTCGCTACTACAATAGCTATAATGAGTATTATGATGGAGACATCAAATCTCCAAGGGACTCAGAGGGACATGGGACTCACACAGCTTCAACCGCTGCAGGCCGAGAGGTGGCAGGCGCAAGCTTCTACGGCTTAGCTCAAGGACTTGCCAGAGGTGGATACCCCAATGCAAGAATTGCTGTGTACAAGGTTTGTTGGGTAAGAGGATGTGCTGCTGCAGATATACTCGCTGCGTTTGATGATGCCATCGCAGATGGGGTCGATATCATATCAGTTTCCCTTGGATTCACCTTCCCTGAACCTTATTTTGAAGATGTCATAGCAATTGGATCTTTCCATGCAATGGGACAAGGGATATTAACCTCAACTTCTGCAGGAAACGATGGTCCATGGTTGGGTTGGGTCAGTAATTACTCGCCTTGGTCGCTGACTGTAGCTGCCAGCAGCATTGATAGGAAATTTGTTTCCAAATTGGTTCTTGGCAATGGACAGATCTTCTCGGGAATTGTCATCAATAACTTGGAGCTCAATGGAACATATCCTTTAATCTGGGGAGGAGATGCAGCAAATGTTTCTGCCCAAGAAACCCCTTTAAGTTCAGCAGACTGCCTTCCTGGGGACCTAGATTCACGCAAAGTCAAGGGAAAGATTGTTCTCTGCGAGTTCCTTTGGGATGGATCTGATTTTCCAAGTAAACAATCACCCAATCTGTTTCCCAATTATCATTCTCATTTTCACATCACAGAAAATGCGACTGTATCCATCATACTGATAATAACCTTTTTCAGGAATCCAATAGCAACAATTTTGGTTGGTGAGACTAGGAAGGATGTAATGGCTCCCATTGTTGCCTCCTTTTCATCCAGAGGTCCCAATCCCATTTCTCCTGATATTCTCAAGCCTGATCTGACTGCACCTGGTGTTGATATCCTCGCGGCCTGGTCACCCATTGTATCTCCATCAGAATACGAGCATGATACCAGGACCGCCCAATACAACATAATCTCCGGCACATCCATGTCTTGTCCACATGCCAGTGGAGCAGCAGCTTATGTGAAGTCCATCCACCCAAGCTGGTCTCCTGCTGCCATTAAATCTGCACTCATGACCACAGCTTATGTGATGGACACAAGGAAGAACGAGGACAAAGAGTTTGCTTACGGTTCTGGCCATATCAACCCGGTGAAGGCGGTGGATCCTGGCCTAATCTACAACACATCTAAGGCAGATTACATCAACTTCCTATGCAAGCAGGGTTACAACACCAGCACATTAAGACTCATCACGGGTGATGACAGTGTTTGTAATAGCACTAAACCTGGGAGGGCATGGGATCTGAACTACCCCTCATTCTCACTGGCCATAGAAGATGGGCAAGATATCATGGGCATTTTCAGTAGGACAGTTACAAATGTAGGATCGCCAAACTCAACCTACCATGCTAGCGTGTACATGCCCAATTCTATTGAGATTGAGGTGGAGCCTCCTGTTCTTTCATTCTCAGCAATTGGAGAGAAGAAATCCTTTACAGTGAGGGTGTATGGACCACAGATAAATATGCAACCAATCATATCAGGTGCTATCCTCTGGACAGATGGTGTCCATGTGGTGAGGGCTCCGCTTGCGGTTTACACAGTCCTCCCATCAGTAACTTCCTCATATAGAAATCCGTCCAAGCAAACAAAGAGACCAAACCTGAAAGCTTCTAGCTCCATGAAGAAATCAGACCTGAAAGGCTCCTCTATATATTACAAAAATGGGATTTTTTAG	2025	0.4573	MDGVVSVVPNSMLELHTTRSWDFMGFTQSHVRDSLGGDVIIGLLDTGIWPESESFSDEGFGPPPAKWKGMCQTENNFTCNNKIIGARYYNSYNEYYDGDIKSPRDSEGHGTHTASTAAGREVAGASFYGLAQGLARGGYPNARIAVYKVCWVRGCAAADILAAFDDAIADGVDIISVSLGFTFPEPYFEDVIAIGSFHAMGQGILTSTSAGNDGPWLGWVSNYSPWSLTVAASSIDRKFVSKLVLGNGQIFSGIVINNLELNGTYPLIWGGDAANVSAQETPLSSADCLPGDLDSRKVKGKIVLCEFLWDGSDFPSKQSPNLFPNYHSHFHITENATVSIILIITFFRNPIATILVGETRKDVMAPIVASFSSRGPNPISPDILKPDLTAPGVDILAAWSPIVSPSEYEHDTRTAQYNIISGTSMSCPHASGAAAYVKSIHPSWSPAAIKSALMTTAYVMDTRKNEDKEFAYGSGHINPVKAVDPGLIYNTSKADYINFLCKQGYNTSTLRLITGDDSVCNSTKPGRAWDLNYPSFSLAIEDGQDIMGIFSRTVTNVGSPNSTYHASVYMPNSIEIEVEPPVLSFSAIGEKKSFTVRVYGPQINMQPIISGAILWTDGVHVVRAPLAVYTVLPSVTSSYRNPSKQTKRPNLKASSSMKKSDLKGSSIYYKNGIF*	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi16g0756	674	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	628	IPR045051	-
	Vvi16g0756	674	SUPERFAMILY	Subtilisin-like	15	487	IPR036852	GO:0004252\|GO:0006508
	Vvi16g0756	674	MobiDBLite	consensus disorder prediction	638	658	-	-
	Vvi16g0756	674	Pfam	Fibronectin type-III domain	530	628	IPR041469	-
	Vvi16g0756	674	PRINTS	Subtilisin serine protease family (S8) signature	105	118	IPR015500	-
	Vvi16g0756	674	PRINTS	Subtilisin serine protease family (S8) signature	421	437	IPR015500	-
	Vvi16g0756	674	PRINTS	Subtilisin serine protease family (S8) signature	36	55	IPR015500	-
	Vvi16g0756	674	FunFam	Subtilisin-like protease SBT1.5	38	246	-	-
	Vvi16g0756	674	CDD	Peptidases_S8_3	13	458	IPR034197	-
	Vvi16g0756	674	Gene3D	Peptidase S8/S53 domain	38	496	IPR036852	GO:0004252\|GO:0006508
	Vvi16g0756	674	CDD	PA_subtilisin_like	243	306	-	-
	Vvi16g0756	674	ProSitePatterns	Serine proteases, subtilase family, serine active site.	422	432	IPR023828	-
	Vvi16g0756	674	Gene3D	-	236	361	-	-
	Vvi16g0756	674	Gene3D	-	500	631	-	-
	Vvi16g0756	674	Pfam	Subtilase family	37	473	IPR000209	GO:0006508\|GO:0008236
	Vvi16g0756	674	ProSiteProfiles	Serine proteases, subtilase domain profile.	20	483	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi16g0756	Vvi-Chr16	15307914	15310516	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi16g0756	1	633	Subtilisin-like Serine Gene Family	AT5G59190	48.851	0.0	587

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi16g0756	-		-	vvi:100853805	1280