Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0746 ATGAAGGATTTGGTCCCCCACCTGCAAAATGGAAAGGGATATGCCAGACAGAAAATAACTTCACCTGCAACAAGTGACCTCTCTCTCTTGTTCTCTCAAGTTTTTTATTTCTCATCAACCTACTGGTTCAAAGCTGATGAAGATATAATTCACAGCAAGATCATAGGAGCGCGCTTCTATGATACTGACAATTTGGCCGACCCTCTCCGTGATACCAAATCACCAAGGGACACATTGGGACATGGGAGTCACACTGCCTCAACTGCAGCAGGGCGAGCAGTGGAAAACGCAAGCTACTACGGGATAGCCAGCGGTGTTGCAAGAGGCGGAGTTCCAAATGCAAGGCTGGCCGTGTATAAAGTATGCTGGGGAGGAGGTTGCAGCCCTGCAGACATTCTAGCTGCTTTTGATGATGCAATAGCCGATGGAGTCGACATTTTATCAATTTCCCTGGGTTCTGAAATGCCAGCCGCGTACAACAAGGAACCAGTGGCTATTGGGTCTTTCCATGCCATGAAAAATGGAATTTTGACCTCTTGTTCTGCAGGAAATAAGGGGCCATACCGGAGACAAATTTCAAACTATGCCCCTTGGGCTTTAACAGTGGCTGCTAGCACCATTGACAGGAGCTTTGTTACCAAAGTGGTGCTTGGCAATGGACAAACAATTCTTGGAACTTCGCTCAATAATTTCCATCTGGATGGCACTTCATTCCCCTTGGTGTACTCGGGAGATGCAGCAAATATAACCTCAGCTATGAGCCCAGACATCGCAGGCATCTGCTTCCCAGGAACTCTAAGCACACTCAAAACCAGAGGAGCAGTTGTCCTCTGCAATATCCTCTCTGATAGTTCGGGAGCCTTTTCTGCTGAGGCTGTAGGCCTCATAATGGCCTCCCCATTTGATGAAATTGCCTTTGCGTTCCCTGTACCAGCAGTGGTGATCAGCTATGATGACCGATTGAAGCTAATTGACTACATCAGAACGACAGAATATCCAACTGCAACTATTCTTTCCACCGAGACAACAACAGATGTCATGGCTCCTACAGTTGTCTCCTTCTCCTCAAGAGGTCCTAACCCTATTAGTCCAGATATTCTCAAGCCTGATGTAACTGCCCCTGGTTCAAACATCCTTGCGGCCTGGTCTCCCCGTGGACTCTCTTCAGTATGGGTGTTCGATGATAGGCAAGTTGACTACTACATCATCTCCGGCACATCTATGTCTTGCCCTCATGTCACTGGTGCTGCATCATATATCAAGGCCGCCCACCCAACATGGTCTCCTGCTGCTATCAAGTCTGCCCTCATGACTACAGCTACAATCATGGACCCAAGGAAGAATGAAGACGCTGAATTTGCCTATGGATCTGGGCACATCAACCCACTGAAGGCAGTGGACCCTGGGTTAGTCTTTGATGCAAGTGAAGCAGATTATGTGGATTTCCTATGCAAACAGGGTTACAACACAACCCATCTAAGAATGATCACTGGGGACTCTAGCGTTTGTCCAAGTAATGAACCAGGGAAAGCATGGGATCTCAACTATCCATCATTTGGTCTCTCATTGCTAGATGGAGAGCCAGTCCAGGCCAGCTACCTCAGGACTGTAACCAATTTTGGGTCACCCAACTCCACTTATCATTCAAACATAACAATGCCACCTTCTTTTGCTGTACTTGTGGAACCACCAGTTCTAACATTTTCAGAGGTTGGGGAGAAGAAATCATTCAAAGTGATCATAACTGGATCGCCAATAGTTCAGGTGCCTGTCATCTCAGGAGCTATTGAATGGACAGATGGTAATCATGTAGTAAGAACCCCCATAGCAGTCTTCAACAACAAACCTTACGTGTTTGCACCTTTGGATGACTACCCGGAAAAGAAGAACTCTCATCCATTTCAAGGTTCCACTATCTACCACCAGAATGGAATTTTTGATGCCATTAAATTCTAG 1956 0.4668 MKDLVPHLQNGKGYARQKITSPATSDLSLLFSQVFYFSSTYWFKADEDIIHSKIIGARFYDTDNLADPLRDTKSPRDTLGHGSHTASTAAGRAVENASYYGIASGVARGGVPNARLAVYKVCWGGGCSPADILAAFDDAIADGVDILSISLGSEMPAAYNKEPVAIGSFHAMKNGILTSCSAGNKGPYRRQISNYAPWALTVAASTIDRSFVTKVVLGNGQTILGTSLNNFHLDGTSFPLVYSGDAANITSAMSPDIAGICFPGTLSTLKTRGAVVLCNILSDSSGAFSAEAVGLIMASPFDEIAFAFPVPAVVISYDDRLKLIDYIRTTEYPTATILSTETTTDVMAPTVVSFSSRGPNPISPDILKPDVTAPGSNILAAWSPRGLSSVWVFDDRQVDYYIISGTSMSCPHVTGAASYIKAAHPTWSPAAIKSALMTTATIMDPRKNEDAEFAYGSGHINPLKAVDPGLVFDASEADYVDFLCKQGYNTTHLRMITGDSSVCPSNEPGKAWDLNYPSFGLSLLDGEPVQASYLRTVTNFGSPNSTYHSNITMPPSFAVLVEPPVLTFSEVGEKKSFKVIITGSPIVQVPVISGAIEWTDGNHVVRTPIAVFNNKPYVFAPLDDYPEKKNSHPFQGSTIYHQNGIFDAIKF* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0746 651 CDD PA_subtilisin_like 215 337 - -
Vvi16g0746 651 Pfam Subtilase family 70 456 IPR000209 GO:0006508|GO:0008236
Vvi16g0746 651 Gene3D Peptidase S8/S53 domain 51 479 IPR036852 GO:0004252|GO:0006508
Vvi16g0746 651 PRINTS Subtilisin serine protease family (S8) signature 404 420 IPR015500 -
Vvi16g0746 651 PRINTS Subtilisin serine protease family (S8) signature 77 90 IPR015500 -
Vvi16g0746 651 SUPERFAMILY Subtilisin-like 56 467 IPR036852 GO:0004252|GO:0006508
Vvi16g0746 651 Pfam Fibronectin type-III domain 513 611 IPR041469 -
Vvi16g0746 651 Gene3D - 208 344 - -
Vvi16g0746 651 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 611 IPR045051 -
Vvi16g0746 651 ProSiteProfiles Serine proteases, subtilase domain profile. 1 466 - -
Vvi16g0746 651 ProSitePatterns Serine proteases, subtilase family, serine active site. 405 415 IPR023828 -
Vvi16g0746 651 Gene3D - 483 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0746 Vvi-Chr16 15196653 15199312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0746 51 612 Subtilisin-like Serine Gene Family AT3G46850 47.803 6.40e-173 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0746 - - vvi:100248908 1201.81