Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0745 ATGGACGGAGTGGTTTCAGTTCTTCCAAACAGCATGCTAGAGCTTCACACAACAAGATCATGGGACTTCATGGGATTTACTCAATCCCATGTTAGAGATTCCCAAGGAGGAGATGTGATTATTGGGCTGCTAGATACAGGAATTTACAATGTGAATAAAAGTCTGACGGAATTGTCGAAATACCACAGCAAGATCATTGGAGCTCGCTACTACAATAGCTATAATGAGTATTATGATGGAGACATCAAATCTCCAAGGGACTCAGAGGGACATGGGACTCACACAGCTTCAACAGCTGCGGGCCGAGAGGTGGCAAGCGCAAGCTTCTACGGCTTAGCTCAAGGACTTGCCAGAGGTGGATACCCCAATGCAAGAATTGCTGTGTACAAGGTTTGTTGGGTAAGAGGATGTGCTGCTGCAGATATACTCGCTGCGTTTGATGATGCCATCGCAGATGGGGTCGATATCATATCAGTTTCCCTTGGATTCACCTTCCCTGAACCTTATTTTGAAGACGTCATAGCAATTGGATCTTTCCATGCAATGGGACAAGGGATATTAACCTCAACTTCTGCAGGAAACGATGGTCCATGGTTGGGTTGGGTCAGTAATTACTCGCCTTGGTCGCTGACTGTAGCTGCCAGCAGCATTGATAGGAAATTTGTTTCCAAATTGGTTCTTGGCAATGGACAGATCTTCTCGGGAATTGTCATCAATAACTTGGAGCTCAATGGAACATATCCTTTAATCTGGGGAGGAGATGCAGCAAATGTTTCTGCCCAAGAAACCCCTTTAAGTTCAGCAGACTGCCTTCCTGGGGACCTAGATTCACGCAAAGTCAAGGGAAAGATTGTTCTCTGCGAGTTCCTTTGGGATGGATCTGGTGTTATCATGGCAGGAGGAGTGGGAATCATAATGCCCGCCTGGTATTTCAATGACTTTGCCTTCACTTTTCCCTTGCCAGCAACACTCCTCCGCAGACAAGATATGGACAAAGTATTGCAGTATGCTAGATTTTCCAAGAACCCAATGGCAACAATTTTGGTTGGTGAGACTAGGAAGGATGTAATGGCTCCCATTGTTGCCTCCTTTTCATCCAGAGGCCCCAATCCCATTTCTCCTGATATTCTCAAGATGAAGAGGTTTACAAGATTTGCAGATATGGACGGAGTGGTTTCAGTTGTTCCAAACAGCATGCTAGAGCTTCACACAACAAGATCATGGGACTTCATGGGATTTACTCAATCCCATTTCATTACCTCGTTAAGTGCAAAATTAAGGAATTTCGGTTACTTCATAGGAATTTGGCCAGAATCCGAGAGCTTCAGCGATGAAGGATTTGGCCCTCCACCTGCAAAATGGAAAGGAATGTGCCAAACTGAGAATAACTTCACCTGCAACAACAAGATCATTGGAGCTCGCTACTACAATAGCTATAATGAGTATTATGATGGAGACATCAAATCTCCAAGGGACTCAGAGGGACATGGGACTCACACAGCTTCAACCGCTGCGGGCCGAGAGGTGGCAGGCGCAAGCTTCTACGGCTTAGCTCAAGGACTTGCCAGAGGTGGATACCCCAATGCAAGAATTGCTGTGTACAAGGTTTGTTGGGTAAGAGGATGTGCTGCTGCAGATATACTCGCTGCGTTTGATGATGCCATCGCAGATGGGGTCGATATCATATCAGTTTCCCTTGGATTAACCTTCCCTGAACCTTATTTTGAAGACGTCATAGCAATTGGATCTTTCCATGCAATGGGACAAGGGATATTAACCTCAACTTCTGCAGGAAACGATGGTCCATGGTTGGGTTGGGTCAGTAATTACTCGCCTTGGTCGCTGACTGTAGCTGCCAGCAGCATTGATAGGAAATTTGTTTCCAAATTGGTTCTTGGCAATGGACAGATCTTCTCGGGAATTGTCATCAATAACTTGGAGCTCAATGGAACATATCCTTTAATCTGGGGAGGAGATGCAGCAAATGTTTCTGCCCAAGAAACCCCTTTAAGTTCAGCAGACTGCCTTCCTGGGGACCTAGATTCACGCAAAGTCAAGGGAAAGATTGTTCTCTGCGAGTTCCTTTGGGATGGATCTGGTGTTATCATGGCAGGAGGAGTGGGAATCATAATGCCCGCCTGGTATTTCAATGACTTTGCCTTCACTTTTCCCTTGCCAGCAACACTCCTCCGAAGACAAGATATGGACAAAGTATTGCAGTATGCTAGATTTTCCAAGAATCCAATAGCAACAATTTTGGTTGGTGAGACTAGGAAGGATGTAATGGCTCCCATTGTTGCCTCCTTTTCATCCAGAGGTCCCAATCCCATTTCTCCTGATATTCTCAAGCCTGATCTGACTGCACCTGGTGTTGATATCCTCGCGGCCTGGTCACCCATTGTATCTCCATCAGAATACGAGCGTGATACCAGGACCGCCCAATACAACATAATCTCCGGCACATCCATGTCTTGTCCACATGCCAGTGGAGCAGCAGCTTATGTGAAGTCCATCCACCCAAGCTGGTCTCCTGCTGCCATTAAATCTGCACTCATGACCACAGCTTATGTGATGGACACAAGGAAGAACGAGGACAAAGAGTTTGCTTACGGTTCTGGCCATATCAACCCGGTGAAGGCGGTGGATCCTGGCCTAATCTACAACACATCTAAGCCAGATTACATCAACTTCCTATGCAAGCAGGGTTACAACACCAGCACATTAAGACTCATCACGGGTGATGACAGTGTTTGTAATAGCACTAAACCTGGGAGGGCATGGGATCTGAACTATCCCTCATTCTCACTGGCCATAGAAGATGGGCTAGATATCATGGGCATTTTCAGTAGGACAGTTACAAATGTAGGATCGCCAAACTCAACCTACCATGCTAGCGTCTACATGCCCAATTCTATTGAGATTGAGGTGGAGCCTCCTGTTCTTTCATTCTCAGCAATTGGAGAGAAGAAATCCTTTACAGTGAGGGTGTATGGACCACAGATAAATATGCAACCAATCATATCAGGTGCTATCCTCTGGAAAGATGGTGTCCATGTGGTGAGGGCTCCGCTCGCGGTTTACACAGTCCTCCCATCAGTAACTTCCTCATATGGAAATCCCTCCAAGCAAACAAAGAGATCAAACCTGAAAGCTTCTAGCCCCATGAAGAAATCAGACCTGAAAGGCTCCTATATATTACAAAAATGGGATTTTTTAGGTGGAACTGCCAAACTGATCACCTCCACGATCCATCAAAAATAA 3261 0.4588 MDGVVSVLPNSMLELHTTRSWDFMGFTQSHVRDSQGGDVIIGLLDTGIYNVNKSLTELSKYHSKIIGARYYNSYNEYYDGDIKSPRDSEGHGTHTASTAAGREVASASFYGLAQGLARGGYPNARIAVYKVCWVRGCAAADILAAFDDAIADGVDIISVSLGFTFPEPYFEDVIAIGSFHAMGQGILTSTSAGNDGPWLGWVSNYSPWSLTVAASSIDRKFVSKLVLGNGQIFSGIVINNLELNGTYPLIWGGDAANVSAQETPLSSADCLPGDLDSRKVKGKIVLCEFLWDGSGVIMAGGVGIIMPAWYFNDFAFTFPLPATLLRRQDMDKVLQYARFSKNPMATILVGETRKDVMAPIVASFSSRGPNPISPDILKMKRFTRFADMDGVVSVVPNSMLELHTTRSWDFMGFTQSHFITSLSAKLRNFGYFIGIWPESESFSDEGFGPPPAKWKGMCQTENNFTCNNKIIGARYYNSYNEYYDGDIKSPRDSEGHGTHTASTAAGREVAGASFYGLAQGLARGGYPNARIAVYKVCWVRGCAAADILAAFDDAIADGVDIISVSLGLTFPEPYFEDVIAIGSFHAMGQGILTSTSAGNDGPWLGWVSNYSPWSLTVAASSIDRKFVSKLVLGNGQIFSGIVINNLELNGTYPLIWGGDAANVSAQETPLSSADCLPGDLDSRKVKGKIVLCEFLWDGSGVIMAGGVGIIMPAWYFNDFAFTFPLPATLLRRQDMDKVLQYARFSKNPIATILVGETRKDVMAPIVASFSSRGPNPISPDILKPDLTAPGVDILAAWSPIVSPSEYERDTRTAQYNIISGTSMSCPHASGAAAYVKSIHPSWSPAAIKSALMTTAYVMDTRKNEDKEFAYGSGHINPVKAVDPGLIYNTSKPDYINFLCKQGYNTSTLRLITGDDSVCNSTKPGRAWDLNYPSFSLAIEDGLDIMGIFSRTVTNVGSPNSTYHASVYMPNSIEIEVEPPVLSFSAIGEKKSFTVRVYGPQINMQPIISGAILWKDGVHVVRAPLAVYTVLPSVTSSYGNPSKQTKRSNLKASSPMKKSDLKGSYILQKWDFLGGTAKLITSTIHQK* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0745 1086 ProSitePatterns Serine proteases, subtilase family, serine active site. 820 830 IPR023828 -
Vvi16g0745 1086 FunFam Subtilisin-like protease SBT1.5 432 633 - -
Vvi16g0745 1086 ProSiteProfiles Serine proteases, subtilase domain profile. 20 297 - -
Vvi16g0745 1086 SUPERFAMILY Subtilisin-like 437 885 IPR036852 GO:0004252|GO:0006508
Vvi16g0745 1086 ProSiteProfiles Serine proteases, subtilase domain profile. 407 881 - -
Vvi16g0745 1086 CDD PA_subtilisin_like 630 752 - -
Vvi16g0745 1086 Gene3D Peptidase S8/S53 domain 38 378 IPR036852 GO:0004252|GO:0006508
Vvi16g0745 1086 Gene3D - 898 1029 - -
Vvi16g0745 1086 Pfam Subtilase family 478 871 IPR000209 GO:0006508|GO:0008236
Vvi16g0745 1086 Pfam Fibronectin type-III domain 928 1026 IPR041469 -
Vvi16g0745 1086 CDD PA_subtilisin_like 225 347 - -
Vvi16g0745 1086 Gene3D Peptidase S8/S53 domain 434 894 IPR036852 GO:0004252|GO:0006508
Vvi16g0745 1086 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 387 1026 IPR045051 -
Vvi16g0745 1086 CDD Peptidases_S8_3 400 856 IPR034197 -
Vvi16g0745 1086 MobiDBLite consensus disorder prediction 1036 1054 - -
Vvi16g0745 1086 SUPERFAMILY Subtilisin-like 15 371 IPR036852 GO:0004252|GO:0006508
Vvi16g0745 1086 MobiDBLite consensus disorder prediction 1036 1056 - -
Vvi16g0745 1086 Pfam Subtilase family 37 377 IPR000209 GO:0006508|GO:0008236
Vvi16g0745 1086 Gene3D - 218 354 - -
Vvi16g0745 1086 Gene3D - 623 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0745 Vvi-Chr16 15161779 15166127 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0745 1 378 Subtilisin-like Serine Gene Family AT5G59190 46.231 2.60e-98 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0745 - - vvi:100243906 1379