Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0739 ATGGTTTACTTGAAAGATGTTGCTCATATCTTGTGTTTTGGATGTTTCAGCATGCAAAGTGCGATAGAACGATACCGTGAACATGCAAAACAAGTTGAAACCAACAATCCAGAATTGGAGCAATATATGCAGGATGCAGAAAGCATGGCAAAGAAGATAGAGCTCCTTGAAGTTTCTCAACGGAAGCTTTTGGGACAAGGCTTGAGCTCATGTTCTCTGGACGAAATCCTAGAGATTGACAGCCAACTGGAGAAGAGCTTAAAGAGCATCAGGGCAAGAAAGGCTCAGATATTCCAGGAGCAGATTGAGGAGCTAAAAGAAAGGGAGAAACAACTGCTAGAAGAAAATGCAAGGTTAAGTCAAAAGGACACAAGGCAGTGGCAACTCTCAGCACAACCAAGTGAAGGTGTAACCTACAGCCAAAGCAGTCCAAGTTCTGAAGTGGAGACCGAGTTGTTCATCGGCCTGCCAGAAATGCGCTGCTCATGA 489 0.4438 MVYLKDVAHILCFGCFSMQSAIERYREHAKQVETNNPELEQYMQDAESMAKKIELLEVSQRKLLGQGLSSCSLDEILEIDSQLEKSLKSIRARKAQIFQEQIEELKEREKQLLEENARLSQKDTRQWQLSAQPSEGVTYSQSSPSSEVETELFIGLPEMRCS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0739 162 MobiDBLite consensus disorder prediction 122 149 - -
Vvi16g0739 162 MobiDBLite consensus disorder prediction 120 150 - -
Vvi16g0739 162 Coils Coil 95 122 - -
Vvi16g0739 162 Pfam K-box region 38 122 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vvi16g0739 162 Coils Coil 39 59 - -
Vvi16g0739 162 ProSiteProfiles K-box domain profile. 39 135 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0739 Vvi-Chr16 14995924 14998494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0739 13 110 MADS-box Gene Family AT2G45660 50.000 1.29e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0739 - - vvi:100268115 261.922