Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0738 ATGGGTCTTGATCTCCTCCCTGACGATAGTCTCTCACCTTCCTCATCCTCACACCAAGCCACCCAACTCCCCCTAGGAAAGTCCCATTTCCTCCATCTTCAACTACAAAATTCAAAGAGACAGCCCCTCCAACATAGGCCAAGCTGCCACCACCGATGTTTCCTGGACAATGATTTTATGGGCACTCGATCTTTGCCTGAGACGCCGCGGATATCGTCTGCTAGAAGATCGGATGTTGATCACCGGCTTTCGCTTCAAATCAATAAGGAGAACATTGGAACGAGTGAGGAATTGGAGTTGTCACGCTCATTATCAATATTGAGTAAAAGAAAGGAGATGATGAAGCATGAAGATGAGAGAAGTCCAAGCCATTATGCTAAGCAGATTGTGAAGCAAGTTAAAGAGAGTGTGGGTCGGAGGGCTGGTTTGGATATTACAAATACTGTCAAATTCAGAGACCAAGGAAGAGACCATGAGCATGCTGCGCCAAACAAATCCAAGAAAAATCCCAAAGTTTGCAGTAAAAGTGGAGATGAATTCAGCCCAAGCAAGCAGCATTCAACACCATCATGTTCTCCAAGGCTTAGATTCCTGGAAACCAAGACCAAACCACTCTCAACATCATCCACAAAGGACCAAAAACCCCACTCTCCAAAACCCTTATCCCCATTATCCTCCTCATCGATGGATAACCATTCACAAGTTAAAATTCCATTGAAGCTAAAGGTACAGCCATTGCAAAATCATCACCATAACCAGCAGTCTCCAATCAAAAAATGCAAGAAAGCCACCGGACAACACTTCGGCGCACGCCTGAAAAAGTCCCCGAAAACCTCGGAAACCATCCGGAACAAGCAAGAAGAGCCATTTGTGCGGCCATCTACAGCAAAAAATCCAAACCATTCAGACAAAAAATGCAAGAAGACCCCATTGTCTACTGATCTTCTCAACATCGCTGTTCCAAACCTTGTCCCATTCAAGAAGGAACCATCACCTCCTACTACAAAAATACCTCAAAAACAGATGCATGGTGGTCAATCATCAAAATGTAGCAGCTCCTTGTCTAGTTGCGGGACACCAAAGTACGAAGAAGAAGCAAGGCATATGCCCGCAGCCCGAGAGAAGGAGAGCGAGGAGAAGGCCATGACGACCACCCAAGCCCAAGGCGCAGCTGAATTTCAGTACATCAGTAGAATACTAAAACGTACTGGCCTAGACAGGGACACCCCAGTGTCATCTATTCAATTCTTCTCTCCCTCCCTCCCTCTACACCCATCAATCTTCCACCAACTCGAAAAACCCCACGCCACCACCCCCCATCCTGCTAACCCATTGCTAATTTTCCACTTAGTTAATGAATTCCTTCCCGAAATCCTTAAACCCCACGTCAAGAATTGTCATGAGATGAGGGGATGGGAACTGTATGAAAAATTGTATGAGAAAATTGGAAGCATTAAATGTTGGAATTGTGAAGTGTTGGAGGACATTGACGCAATGGTAGATGAAGACTTGCCGAAATGGAAATTGAGGAGAGCGAGAGGGTATGCGGAGGAGGAAGAAGAGGAGATTGTAGCAGAGATTGAGAGGGACATACTGGAGAAACTGGTACATGAGACCACCGTGGATTACGGGGTGGGAGTCCGTACAGAAACGGCGCTGCTACACTGTGAGTATGTGACAGAGGCCACCAAACAGTGTCTGACCCCATCACATGGGTGA 1719 0.4636 MGLDLLPDDSLSPSSSSHQATQLPLGKSHFLHLQLQNSKRQPLQHRPSCHHRCFLDNDFMGTRSLPETPRISSARRSDVDHRLSLQINKENIGTSEELELSRSLSILSKRKEMMKHEDERSPSHYAKQIVKQVKESVGRRAGLDITNTVKFRDQGRDHEHAAPNKSKKNPKVCSKSGDEFSPSKQHSTPSCSPRLRFLETKTKPLSTSSTKDQKPHSPKPLSPLSSSSMDNHSQVKIPLKLKVQPLQNHHHNQQSPIKKCKKATGQHFGARLKKSPKTSETIRNKQEEPFVRPSTAKNPNHSDKKCKKTPLSTDLLNIAVPNLVPFKKEPSPPTTKIPQKQMHGGQSSKCSSSLSSCGTPKYEEEARHMPAAREKESEEKAMTTTQAQGAAEFQYISRILKRTGLDRDTPVSSIQFFSPSLPLHPSIFHQLEKPHATTPHPANPLLIFHLVNEFLPEILKPHVKNCHEMRGWELYEKLYEKIGSIKCWNCEVLEDIDAMVDEDLPKWKLRRARGYAEEEEEEIVAEIERDILEKLVHETTVDYGVGVRTETALLHCEYVTEATKQCLTPSHG* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0738 572 MobiDBLite consensus disorder prediction 176 233 - -
Vvi16g0738 572 Pfam Domain of unknown function (DUF4378) 392 538 IPR025486 -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 324 379 - -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 1 22 - -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 247 307 - -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 148 233 - -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 334 359 - -
Vvi16g0738 572 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 546 - -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 150 174 - -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 273 287 - -
Vvi16g0738 572 MobiDBLite consensus disorder prediction 361 379 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0738 1 554 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.060 4.97e-60 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0738 - - vvi:104882099 1081.24