Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0720 ATGAATTTCATGGGTTTTTTCTTTCATCCCATCAATCTTGCTGGTATTGCTTTAGCGGTAATTCTATCAATTAGCATAATTAAAATCTTTGCAGGAAGATTGGCAGAGAAGAAAAGGAGGTATCATCCGATTGCAGGCACTGTCCTTCATCAGCTTGCTAACTACCCGAGTCTGCACCACTACATGACAGACCTTGCTGGCAAACATAGAACTTACAGATTACTCAGCTTTCTCAGGAGCGAGGTTTACACTGCAGATCCCATAAATGTTGAATACATCCTCAAAACAAACTTTCCAAACTATGGCAGGGGGTGGTACCATCATACAGTTTTGGAAGATCTTTTAGGAGATGGGATCTTCACTGTGGATGGAGATTTGTGGAGGCAGCAGAGGAAGCTGTCAAGCTATGAGTTCACCAAAATGCTGAAGGACTTCAGCTGTGGAATCTTTGGAAGTAATGCAGCAAAGCTTGCTGGGGGCCTATTCATGAAGTCGATGATGGACTCGGTCTTCAAGGTTGTTCTGGGTGTGGAACTGGACAGCATATGTGGAACAAATCAAGAAGGTACCCAGTTTTCAAACTCTTTTGATGAAGCAAATGAATTGACCTTTTATCGCTACGTGGATCTCTTTTGGAAGGCCAAGCGGTTCTTGAATGTTGGCTCGGAGGCAAAACTGAGGAATAGCATCAAAGTTGTTGACCAATATGTGAATAAAGTGATTCAAAGCAAGATTGAAGAAATTCACAAGTTGCAAGAAGTATCAGTACCTATGAAAAAAGGAGATGTTTTATCGAGGTTTCTGGAATTGAGGAAGACAGATCCCAAGTACCTAAAAGACATAATCCTCAGTTTCATAATTGCTGGCAAAGACACCACAGCTCTTACTCTTTCCTGGTTCCTTTACATGCTCTGCAAGCATCCTCCCATACAGGAAAAGATTGCCCAGGAAGTGAAGGAAGCAACAAAAGCCAGAGATGCTTCCACCTTGGATGAGCTTGCAGCCAGCATAACTGAAGAATCCCTTGACAAGATGCAGTATCTCCATGCAGCCCTAACCGAGACTCTAAGACTCTATCCCCCGGTTCCAGTGGATGGAAAGCTCTGCCTCTCTGATGATACCTGGCCAGATGCATTCAGTGTGAGGAAAGGGGATATTGTGGCATACCAACCTTATGCCATGGGCAGGATGGCATTCTTGTGGGGCACTGATGCAGAGGATTTTCGACCGGAAAGATGGTTAGATGAGAATGGCATTTTTTGCCCTGAAAGCCCATTTAAGTTCACAGCCTTTCAGGCTGGTCCAAGAGTTTGTCTAGGAAAGGACTTTGCTTATAGGCAGATGAAGATCTTTGCAGCTATCCTTTTAAGCAGCTTTATATTCAAGCTGAGTGATGAAAACAAGGCTGTCAATTACAAGACCATGATTAATCTGCATATTGATGGGGGCCTCGATGTTCATGCCTCCCACAGATTGGGGCATGGAAAGCTTCTAGTTGCGTAA 1503 0.4378 MNFMGFFFHPINLAGIALAVILSISIIKIFAGRLAEKKRRYHPIAGTVLHQLANYPSLHHYMTDLAGKHRTYRLLSFLRSEVYTADPINVEYILKTNFPNYGRGWYHHTVLEDLLGDGIFTVDGDLWRQQRKLSSYEFTKMLKDFSCGIFGSNAAKLAGGLFMKSMMDSVFKVVLGVELDSICGTNQEGTQFSNSFDEANELTFYRYVDLFWKAKRFLNVGSEAKLRNSIKVVDQYVNKVIQSKIEEIHKLQEVSVPMKKGDVLSRFLELRKTDPKYLKDIILSFIIAGKDTTALTLSWFLYMLCKHPPIQEKIAQEVKEATKARDASTLDELAASITEESLDKMQYLHAALTETLRLYPPVPVDGKLCLSDDTWPDAFSVRKGDIVAYQPYAMGRMAFLWGTDAEDFRPERWLDENGIFCPESPFKFTAFQAGPRVCLGKDFAYRQMKIFAAILLSSFIFKLSDENKAVNYKTMINLHIDGGLDVHASHRLGHGKLLVA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0720 500 Gene3D Cytochrome P450 38 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 Pfam Cytochrome P450 162 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0720 500 CDD CYP86A 70 484 - -
Vvi16g0720 500 PANTHER CYTOCHROME P450 27 485 - -
Vvi16g0720 500 SUPERFAMILY Cytochrome P450 40 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0720 Vvi-Chr16 14592615 14594689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0720 13 491 Cytochrome P450 AT2G45510 50.392 2.66e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0720 - - vvi:100265146 981.474