Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0663 ATGGGTTGCAAATGGGAAGCGTGGGTGGCAGATATATGGGATCCCTTGGCTGAGGGGGGTTGGGGGGGTTGGAACCCCTGTTTTTTAAGAGCATTCAATGATTGGGAGGTAGAGGAGGCGGAAAGATTTATGGAGAGGCTTCAGAGTAAAAAAGTTATTGAGGATGTGGAGGATATAGTGTCCTGGATTGAAACCAAGAGTGGTAAATTCTCGGTCAAGTCTCTCTATGTAGCCCTTGAAGCGGGTGGTTCATCTTTGTTTCCTTTAAGCTTTATTTGGAATGTGAACGTGCAGCCCAAGATTAGCTTCTTCGCATGGGAGGCTACATGGGGCAAAGCCTTAACCTTGGATATGGTCCAGAAAAGAGGATGGGCCTTGGCAAATAGATGCTTTATGTGTCTTGAGAAAGAGGAGAACATAAACCATCTTCTTTTTCATTGTTCAAGAACAAGGGCGTTATGGGATCTTCTTTTTGCTTTATTTGGGGTGTCTTGGGTTTTGTCTTCTTCAGTTAGAGAGACCCTTCTAAGTTGGAATGGTTTTTTCCTAGGCAAAAATCGTAAGAAGGCGTGGAGAGCTGCTCCTCTTCACATTTCCTGGACGGTTTGGAAGGAGAGGAATAGATTGGCTTTCAAGGATGAATCGTTGTCATTTCAGAAACTGAAACACTCTTTTATTCTTACTTTTTGGGCTGAGGCTAAGTTATTCATAGACGATTGCCCTCTAACTATAGCTAATTTTATTGATTGGACATGGTCGTTGCTGCAACAGACAACTTCCACCACAGTGGAGTGGGCAATGGCAGAACTGCTTCAACACCCACAAACAATGCAAAAATTCCAAGAAGAATTGGAACAAGTAGTAGGAATTGAAAACATTGTAGAAGAGTCCCATCTCTTCCAACTCCCCTACTTGGATGCAGTCATAAAAGAAGCCCTCCGTTTGCATCCCCCGCTGCCCCTCCTAATCCCACACTCTCCTAGTACATCTTGCATCATTTCCGGGTACACTATCCCAAAGGGCTCGCGGATACTCGTCAATGCATGGGCGATGCAAAGGGACCCCGAGGCCTGGGGGCATCCACTGGAGTTTAAACCAGAGAGGTTCTTGGAAGATGCTGCAAGTGCTGACTACCAAGGCAACAATTTCAACTTTCTGCCATTTGGGTCAGGGAGGAGGATTTGTGCTGGCTTACCTCTAGCTGAGAGGATGCTGCCATATGCTGCCATATGGGAGGATAAGGGCTGGTCGTGGTGGTGGGATGGACTCACTGAAAACACCATTTTTCGAGTAGTGGCCGCCCTTTTGACTGCAGCAATTGCCATTTCTTGGTATGCCTGGCTCATCAAGAAAGCAAATAGAGGCCTCCCACCCTTGCCACCCGGCCCAAGAGGCTTACCGTTGCTGGGAAACCTTCTCTTCATTGAGCCTGATCTTCATCGGTACTTCTCCAAGTTGTCCCAACTCTATGGTCCCATTTTCAAGCTTCAGCTAGGCAGCAAGACTTGCATTGTGATAAACTCGTCTTCCGTGGCCAAAGAAATTCTCAAAGATCACGATGTGATTTTTGCTAACCGTGATGTACCTATTTCTGTATTAGCCTTCACATATGGGGGGCAGGACATAGTCTGGAGTCATTATAGCCCCGAATGGCGTAAACTACGCAAAGTTTTTGTGCAAGAAATGATGAGCAGTGCAAGCCTTGATGCTTGTTCTGCACTTAGAAGAAGAGAGGTGCAAGAAATGGTGAGGGACGTGTATGGAAAGGTGGGGACAACAATTAATATGGGGGATCAAATGTTTCTAACTGTATTAAATGTTGTAACAAGCATGTTATGGGGTGGAACACTTCATGGTGAGGATAGGAGTCGAATTGGAATGGAGTTTAGACGAGTCATTGTGGAGACGGTTGAATTGGTGGGAAAACCTAATATTTCTGATCTTTTTCCTGCTCTTGCATGGTTTGATCTCCAAGGAATTGAATCGAGGGCGAAAAAGCTTGTTTTGTGGTTTGATAGAATTTTCGAATCCCTGATTGCTCAGAGGACACAAGTGGATGGAGCTGATGGAGAAGGCAAGAACAAGAGCAAGGAAAGCAAGGACTTCCTGCAGTTTATGTTGGAGCTGATGCATCAAGGAGATGATAAAACCTCGGTCTCCATCACCCAACTCAAGGCTTTGTTCATGGACATGGTCGTTGCTGCAACAGACACAACTTCCACCACAGTGGAGTGGGCAATGGCAGAACTGCTTCAACACCCACAAACAATGCAAAAAGTCCAAGAAGAATTGGAACAAGTAGTAGGAATTGAAAACATTGTAGAAGAGTCCCATCTCTTCCAACTCCCCTACTTGGATGCAGTCATAAAAGAAGCCCTCCGTTTGCATCCCCCGCTGCCCCTCCTAATCCCACACTCTCCTAGTACATCTTGCATCATTTCCGGGTACACTATCCCAAAGGGCTCGCGGATACTCGTCAATGCATGGGCGATGCAAAGGGACCCCGAGGCATGGGGGCATCCACTGGAGTTTAAACCAGAGAGGTTCTTGGAAGATGCTGCAAGTGCTGACTACCAAGGCAACAATTTCAACTTTCTGCCATTTGGGTCAGGGAGGAGGATTTGTGCTGGCTTACCTCTACTTGAGAGGATGCTGCCATATGTTTTGGCTTTTCTTTTACATTCCTTTGATTGGAAATTACTTGATGGCAGGACAAGGGTTGATTTTGAGGAAAGGTTGGCAATCGTTTCGAAGAAAAATGAGCCACTTCTCGCCATTCCAACTGCGAGATTGTCCAACTTATGCCATTATGATCCAATTGAATGA 2826 0.4593 MGCKWEAWVADIWDPLAEGGWGGWNPCFLRAFNDWEVEEAERFMERLQSKKVIEDVEDIVSWIETKSGKFSVKSLYVALEAGGSSLFPLSFIWNVNVQPKISFFAWEATWGKALTLDMVQKRGWALANRCFMCLEKEENINHLLFHCSRTRALWDLLFALFGVSWVLSSSVRETLLSWNGFFLGKNRKKAWRAAPLHISWTVWKERNRLAFKDESLSFQKLKHSFILTFWAEAKLFIDDCPLTIANFIDWTWSLLQQTTSTTVEWAMAELLQHPQTMQKFQEELEQVVGIENIVEESHLFQLPYLDAVIKEALRLHPPLPLLIPHSPSTSCIISGYTIPKGSRILVNAWAMQRDPEAWGHPLEFKPERFLEDAASADYQGNNFNFLPFGSGRRICAGLPLAERMLPYAAIWEDKGWSWWWDGLTENTIFRVVAALLTAAIAISWYAWLIKKANRGLPPLPPGPRGLPLLGNLLFIEPDLHRYFSKLSQLYGPIFKLQLGSKTCIVINSSSVAKEILKDHDVIFANRDVPISVLAFTYGGQDIVWSHYSPEWRKLRKVFVQEMMSSASLDACSALRRREVQEMVRDVYGKVGTTINMGDQMFLTVLNVVTSMLWGGTLHGEDRSRIGMEFRRVIVETVELVGKPNISDLFPALAWFDLQGIESRAKKLVLWFDRIFESLIAQRTQVDGADGEGKNKSKESKDFLQFMLELMHQGDDKTSVSITQLKALFMDMVVAATDTTSTTVEWAMAELLQHPQTMQKVQEELEQVVGIENIVEESHLFQLPYLDAVIKEALRLHPPLPLLIPHSPSTSCIISGYTIPKGSRILVNAWAMQRDPEAWGHPLEFKPERFLEDAASADYQGNNFNFLPFGSGRRICAGLPLLERMLPYVLAFLLHSFDWKLLDGRTRVDFEERLAIVSKKNEPLLAIPTARLSNLCHYDPIE* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0663 941 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Vvi16g0663 941 SUPERFAMILY Cytochrome P450 460 930 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 743 769 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 723 740 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 865 875 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 487 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 786 804 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 511 532 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 827 851 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 603 621 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS E-class P450 group I signature 875 898 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 FunFam Cytochrome P450 76C4 451 926 - -
Vvi16g0663 941 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 868 877 IPR017972 GO:0005506|GO:0016705
Vvi16g0663 941 SUPERFAMILY Cytochrome P450 175 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 Pfam zinc-binding in reverse transcriptase 70 154 IPR026960 -
Vvi16g0663 941 PRINTS P450 superfamily signature 787 798 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS P450 superfamily signature 866 875 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PRINTS P450 superfamily signature 734 751 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 PANTHER OS08G0547900 PROTEIN 414 937 - -
Vvi16g0663 941 Gene3D Cytochrome P450 453 930 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 Pfam Cytochrome P450 257 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 Pfam Cytochrome P450 460 920 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 CDD CYP76-like 487 927 - -
Vvi16g0663 941 Gene3D Cytochrome P450 205 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0663 941 FunFam Predicted protein 255 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0663 Vvi-Chr16 13549389 13582228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0663 434 937 Cytochrome P450 AT4G12300 49.704 4.28e-176 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0663 - - vvi:109124179 946.421