Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0662 ATGATTGCAGTTCTTCTCAGGAACCTTGTGAACTTAGTCTCTGAAGGCTGGTCGTGGTGGTGGGATGGACTCACTGAAAACACCATTTTTCGAGTAGTGGCCGCCCTTTCGACTGCAGCAATTGCCATTTCTTGGTATGTCTGGCTCATCAAGAAAGCAAGTAGAGGCCTCCCACCCTTGCCACCCGGCCCAAGAGGCTTGCCGTTGCTGGGAAACCTTCTCTTCATTGAGCCTGATCTTCATCGGTACTTCTCCAAGTTGTCCCAACTCTATGGTCCCATTTTCAAGCTTCAGCTAGGCAGCAAGACTTGCATTGTGATAAGCTCGTCTTCCGTGGCCAAAGAAATTCTCAAAGATCACGATGTGATTTTTGCTAACCGTGATGTACCTATTTCTGCATTAGCCCTCACATATGGGGGGCAAGACATAGCCTGGAGTCATTATAGCCCCGAATGGCGTAAACTACGCAAAGTTTTTGTCCAAGAAATGATGAGCAGCGCAAGCCTTGATGCTTGTTCTGCACTTAGGAGAAGAGAGGTGCAAGAAATGGTGAGGGACGTGTATGGAAAGGTGGGGACACCAATTAATATGGGGGATCAAATGTTTCTAACTGTATTAAATGTTGTAACAAGCATGTTATGGGGTGGAACACTTCATGGTGAGGATAGGAGTCGAATTGGAATGGAGTTTAGACGAGTCATTGTGGAGACGGTTGGATTGATGGGAAAACCTAATATTTCTGATCTTTTTCCTGCTCTTGCATGGTTTGATCTCCAAGGAATTGAATCAAGGGCGAAAAAGCTTGTTTTGTGGTTTGATAGGATTTTCGAATCCCTGATTGCTCAGAGGACACAATTGGATGGAGCTGATGGAGGAGGCAAGAACAAGAGCAAGGAAAGCAAGGACTTCCTGCAGTTTATGTTGGAGCTGATGCATCAAGGAGATGATAAAACCTCGGTCTCCATCACCCAGCTCAAGGCTTTGTTCATGGACATAGTCGTTGCTGCAACAGACACATCGTCCACCACAGTGGAGTGGGCAATGGCAGAACTGCTTCAACACCCACAGACAATGCAAAAAGCCCAAGAAGAATTGGAAAAAGTAGTAGGAAATAAAAACATTGTAGAAGAGTCTCATCTCTTCCAACTGCCCTACTTGGGTGCAGTCATAAAGGAAACCCTCCGTTTGCATCCCCCGCTGCCGCTCCTAGTCCCACACTCTCCTAGTACGTCTTGCATCATTTCCGGGTACACTATCCCAAAGGGCTCGCGGATACTCTTCAATGCATGGGCAATGCAAAGAAACCCCGAGGTCTGGGAGCATCCATTGGAGTTTATACCAGAGAGGTTCTTGGAAGATGCTGCTAGTGCCGACTACAAAGGCAACAATTTCAACTTTATGCCATTTGGGTCAGGGAGGAGGATTTGTGCTGGCTTACCTCTAGCTGAAAAGATGCTGCTATATGTTTTGGCTTCTCTTTTACATTCCTTTGATTGGAAATTACCTGATGGGAGGACAAGCGTTGATTTGGAGGAGAGGTTTGGAATCGTTTTGAAGAAAAGTGAGACACTTCTCGCCATTCCAACTGCAAGATTGTCCAATTAA 1605 0.4617 MIAVLLRNLVNLVSEGWSWWWDGLTENTIFRVVAALSTAAIAISWYVWLIKKASRGLPPLPPGPRGLPLLGNLLFIEPDLHRYFSKLSQLYGPIFKLQLGSKTCIVISSSSVAKEILKDHDVIFANRDVPISALALTYGGQDIAWSHYSPEWRKLRKVFVQEMMSSASLDACSALRRREVQEMVRDVYGKVGTPINMGDQMFLTVLNVVTSMLWGGTLHGEDRSRIGMEFRRVIVETVGLMGKPNISDLFPALAWFDLQGIESRAKKLVLWFDRIFESLIAQRTQLDGADGGGKNKSKESKDFLQFMLELMHQGDDKTSVSITQLKALFMDIVVAATDTSSTTVEWAMAELLQHPQTMQKAQEELEKVVGNKNIVEESHLFQLPYLGAVIKETLRLHPPLPLLVPHSPSTSCIISGYTIPKGSRILFNAWAMQRNPEVWEHPLEFIPERFLEDAASADYKGNNFNFMPFGSGRRICAGLPLAEKMLLYVLASLLHSFDWKLPDGRTSVDLEERFGIVLKKSETLLAIPTARLSN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0662 534 Pfam Cytochrome P450 61 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PANTHER OS08G0547900 PROTEIN 16 534 - -
Vvi16g0662 534 Gene3D Cytochrome P450 46 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Vvi16g0662 534 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 FunFam Cytochrome P450 76C4 52 527 - -
Vvi16g0662 534 Coils Coil 358 378 - -
Vvi16g0662 534 SUPERFAMILY Cytochrome P450 61 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0662 534 CDD CYP76-like 88 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0662 Vvi-Chr16 13531881 13534050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0662 38 534 Cytochrome P450 AT4G12300 51.600 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0662 - - vvi:100266899 1013.06