Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0652 ATGGCATATGGCCGTCGGGATACTGGGAAGAGCCCAATCCGAAGTGGGGTTGGGCAATGGTGCTCCTCCAATCTTCCAAAGACTGTTGTTAGGCACAACTCACAAGCAGTGCTGATGAGCAGCATGGTTCATAGACTTTTGGCTATGGCATCTTCTTTCTGGTCACAGTGGTGCAACATTGGCTATGGAGGTGCTGGACTCTTTGTCTCTTTTGCGGTTATTGCTGTGGGTGCAATCTCATGGCACATATTGAGGAAGGAAAGTCTTGCGTTGCCACCAGGTCCTCGAGGCATGCCTGTACTAGGCAACCTCCCATTTCTACATCCTGACCTTCACAGCTGCTTTGCTAAAATGGCTCAAAAATATGGCCCGGTGATGAGGCTTTGGCTCGGTAACAAGCTTACTGTTGTACTGAGCTCACCCTCTCTAGCAAAGGAGGTTCTTCGAGACAACGATGCTATTTTTGCGGACCGGGACACGCCAATTGCAATGCTAACGATGACATATGGTGGCTCTGGGTTGATATGGGCGCGGTGTGACCAAAACTGGCGCATGCTTCGGAAGGTTTGGGTTGGGGAGATGCTAAGCAAAGTGAGCCTTGACAGGCTTTATGCTCTTAGACACCGAGAGGTTTGGGATTCGATGAGAAGGATATATGCAAATGCAGGTACATCAGTAAATGTCAATGAGCATACCTTCTCGGCTATGATAAATGTGATTACCAGCATGTTATGGGGAAGAACCCTAGAAGGTGAGGAAAGAAGACATGCAGACAAAGAGTTTCGACAAGTGGTGTGGGAAATGTTTGACCTCTTAACAAAACCTGATGTTTCAGATCTTTTTCCTGTTTTGGCCCCATTGGATATACAAGGCAAGAATAGTAAGATGAAGAAGCTAGGATCAAGATTGGATCGGATTTTCGACTTCATCATCAATCACCATGAAGTTAAAGGACTAAGCATGGAAGGGATAGAAAACAAAGATAGAGAGCACAAGGATTTACTACAGATCTTTCTGCAGAATGAGGAAGGCTCTAAGGGAATCTTGGACAAGACTCAACTCAAGGCCTTGTTCTTAGACATGGTAGCAGCAGGAACAGATACAGCATCAAGCGCAGTAGAATGGGCGATGGCTGAACTGATGAACAAACCCGAAAAAATGGAAAGAGCCCAAAAAGAACTAGAACAAGTGGTTGGTATGAACAATATGGTAGAAGAGACTCATCTCCCAAAACTTCCTTTTCTAAATGCCGTAGTAAAGGAAGTTCTAAGGTTACACCCTCCCGGACCATTCCTGGTGCCTCGTCGCACTCGTGAGCCATGTGTTCTAAGGGGCTATACAATTCCAAGCGGCACACAAGTCCTGGTAAATGCGTGGGCGATACATAGAGATCCTGAATTTTGGGACAGTCCTTCAGAGTTTCAGCCTGAAAGGTTCTTGAGCGGGAGCTTGAAATGTGATTATAGTGGAAATGATTTTCGATATCTTCCTTTCGGGTCAGGGAGGAGAATTTGTGCAGGAGTTCCATTAGCTGAGCGAATAGTACCACATATCCTAGCTTCAATGTTACATTTGTTCGATTGGAGGCTACCGGATGGGGTGAATGGTGTCGATCTCACTGAGAAGTTTGGCCTAGTGTTAAGAAAAGCGACGCCCTTTGTCGCAATTCCGAAGCCAAGACTATCAAACCTAGACTTATATACTTAA 1707 0.4587 MAYGRRDTGKSPIRSGVGQWCSSNLPKTVVRHNSQAVLMSSMVHRLLAMASSFWSQWCNIGYGGAGLFVSFAVIAVGAISWHILRKESLALPPGPRGMPVLGNLPFLHPDLHSCFAKMAQKYGPVMRLWLGNKLTVVLSSPSLAKEVLRDNDAIFADRDTPIAMLTMTYGGSGLIWARCDQNWRMLRKVWVGEMLSKVSLDRLYALRHREVWDSMRRIYANAGTSVNVNEHTFSAMINVITSMLWGRTLEGEERRHADKEFRQVVWEMFDLLTKPDVSDLFPVLAPLDIQGKNSKMKKLGSRLDRIFDFIINHHEVKGLSMEGIENKDREHKDLLQIFLQNEEGSKGILDKTQLKALFLDMVAAGTDTASSAVEWAMAELMNKPEKMERAQKELEQVVGMNNMVEETHLPKLPFLNAVVKEVLRLHPPGPFLVPRRTREPCVLRGYTIPSGTQVLVNAWAIHRDPEFWDSPSEFQPERFLSGSLKCDYSGNDFRYLPFGSGRRICAGVPLAERIVPHILASMLHLFDWRLPDGVNGVDLTEKFGLVLRKATPFVAIPKPRLSNLDLYT* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0652 568 SUPERFAMILY Cytochrome P450 92 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 498 507 IPR017972 GO:0005506|GO:0016705
Vvi16g0652 568 PRINTS E-class P450 group I signature 495 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 235 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 416 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 353 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 143 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 457 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 119 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS E-class P450 group I signature 505 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 Coils Coil 387 407 - -
Vvi16g0652 568 Pfam Cytochrome P450 92 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PANTHER OS08G0547900 PROTEIN 68 567 - -
Vvi16g0652 568 CDD CYP76-like 119 557 - -
Vvi16g0652 568 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS P450 superfamily signature 496 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 Gene3D Cytochrome P450 83 563 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0652 568 FunFam Putative cytochrome P450 superfamily protein 354 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0652 Vvi-Chr16 13378319 13382498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0652 68 567 Cytochrome P450 AT4G12320 45.652 6.38e-166 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0652 - - vvi:100250930 1081.24