Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0619 ATGGCAAGAGCCTCAGTACTAGTAGTCTTGGTGGTGGTTTCAGTACTTTTGTACACCTCCAGGGTTGCTGAGTCTGCGGCTGCCAATTCCGGCAGCACTAGTTTCATCAAGGCCAAGTGCAGTGCCACCCGGTACCCAGCATTGTGCGTCCAATCGCTGTCAGTGTATGCAAGCACAATTCAGAAAAGCCCGAAGCAGTTGGCTCACACCGCTTTGACGGTGAGCCTAGCCAAGGCTCAGTCCGCCAAGGCGTTTGTGTCCAAATTGGGTAAGATTAAGGGCATGAAGGCTAGGGAGTTGGAGGCGGTTCAGGACTGTTTAGAAGAAATGAACGACAGCATCGACCGTCTTTCCCGGTCCGTACAGGAGCTTGAGGAAGCTGGGAAGAGCAAGGGGCAGGACTTTTTGTGGCACATGAGCAATGTTGACACTTGGGTCAGCGCTGCCCTAACCGATGATAATACGTGTGTTGATGGATTCGCTGGTCGGGCCCTGGACGGCAGGGTTAAGGCATCGATTAGGGGTTGGTTGGTTACTGTTGCGCAAGTCACTAGCAATGCGTTAGCCTTGGTTAACCAATTCGCTGCCAAGAACTGA 597 0.5276 MARASVLVVLVVVSVLLYTSRVAESAAANSGSTSFIKAKCSATRYPALCVQSLSVYASTIQKSPKQLAHTALTVSLAKAQSAKAFVSKLGKIKGMKARELEAVQDCLEEMNDSIDRLSRSVQELEEAGKSKGQDFLWHMSNVDTWVSAALTDDNTCVDGFAGRALDGRVKASIRGWLVTVAQVTSNALALVNQFAAKN* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0619 198 FunFam Pectin methylesterase inhibitor 1 31 194 - -
Vvi16g0619 198 NCBIfam pectinesterase inhibitor domain 7 193 IPR006501 GO:0004857
Vvi16g0619 198 Pfam Plant invertase/pectin methylesterase inhibitor 34 190 IPR006501 GO:0004857
Vvi16g0619 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 194 IPR035513 -
Vvi16g0619 198 Coils Coil 100 127 - -
Vvi16g0619 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 190 - -
Vvi16g0619 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 194 IPR035513 -
Vvi16g0619 198 CDD PMEI-like_3 40 196 - -
Vvi16g0619 198 SMART PMEI_2 31 190 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0619 Vvi-Chr16 12517794 12518390 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0619 30 191 Carbohydrate Esterase AT1G53830 31.288 2.83e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0619 - - vvi:100232884 367.081