Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0614 ATGTACCCTAAGCTATGCTTCAAAACCCTCTCGGCTTATGCCAGCACCATCCAAACAAGCCATATGGAGTTGGCCAATGCAGCCCTCTGTGTGAGCCTAAAGGGCGCTCAATCCTCTTCAAACAAGGTACTGAAGTTATCAAAAGGGCAGGGGCTAAGCCGTAGAGAAGCCGCAGCGATAACGGATTGCATTGAGAACATGCAGGACTCGGTGGATGAGCTCCAACAATCTCTGGTGGCGATGAAGGACCTTCAAGGGCCTGATTTTCAAATGAAAATGAGTGATATAGTGACATGGGTGAGTGCAGCTCTGACAGATGAAGACACATGCATGGATGGATTCGCAGAGCATGCCATGAAAGGGGACCTTAAGAGCACTATTAGGAGCAATATTGTGAGTGTTGCTCAGTTAACCAGCAATGCTTTGGCCATCATCAACAAGTTTCTATCTATTCAGGGCAATCAACTCTAA 471 0.4713 MYPKLCFKTLSAYASTIQTSHMELANAALCVSLKGAQSSSNKVLKLSKGQGLSRREAAAITDCIENMQDSVDELQQSLVAMKDLQGPDFQMKMSDIVTWVSAALTDEDTCMDGFAEHAMKGDLKSTIRSNIVSVAQLTSNALAIINKFLSIQGNQL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0614 156 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 148 IPR035513 -
Vvi16g0614 156 FunFam Pectinesterase inhibitor 3 1 149 - -
Vvi16g0614 156 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 149 IPR035513 -
Vvi16g0614 156 Pfam Plant invertase/pectin methylesterase inhibitor 2 144 IPR006501 GO:0004857
Vvi16g0614 156 NCBIfam pectinesterase inhibitor domain 2 147 IPR006501 GO:0004857
Vvi16g0614 156 CDD PMEI-like_3 1 148 - -
Vvi16g0614 156 SMART PMEI_2 1 144 IPR006501 GO:0004857
Vvi16g0614 156 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 143 - -
Vvi16g0614 156 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0614 Vvi-Chr16 12473268 12473738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0614 1 145 Carbohydrate Esterase AT1G53830 34.000 2.14e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0614 - - vvi:100258792 303.138