Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0609 ATGGAAGGCTCATTTTTTTCTAGCCATTTCCTTCCAGCTCTTCTCATTTTTCTTTCCCTTACTTCCTACATAAACTTAAGCTCAGCAGCCAGGCCTGCTGCTGATAAAGCCAGCACCGAGTTCATCCGAACATCTTGTGGTACAACCACTTATCCCAGACTTTGCTACACCTCCCTCTCAGCTCATGCCAGTGTAATCCAAACCAGCCCAAAGCTTCTAGCAGACACAGCCCTTGCTGTGACCCTTTCAACCGCACGATCTACATCATCCCTGATGTCAAAGATGGTGCAAAGTCATGGCCTAAAGCCTAGAGAAGTTGCAGCCATGCACGACTGTGTGGAAGAGTTGAGCGACTCAGTAGATCAGCTTCGAAGAGCAATGGGGGAGATGACCCAAATAAAAGGCTCCAATTTTGGGCTCATGATGGATGACATACAAACATGGGTTAGTACTGCCTTGACGGATGAGGACACGTGCACTGATGGGTTCGCCGGAAACGCCATGAATGGGAATCTAAAGACCACCGTGAGGGCTCGCATAGTTAACATGGCGCATATGACTAGCAACGCCTTGGGTTTGATCAATAGTTATGCTTCCCTTCACAATTAG 609 0.4795 MEGSFFSSHFLPALLIFLSLTSYINLSSAARPAADKASTEFIRTSCGTTTYPRLCYTSLSAHASVIQTSPKLLADTALAVTLSTARSTSSLMSKMVQSHGLKPREVAAMHDCVEELSDSVDQLRRAMGEMTQIKGSNFGLMMDDIQTWVSTALTDEDTCTDGFAGNAMNGNLKTTVRARIVNMAHMTSNALGLINSYASLHN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0609 202 Coils Coil 113 133 - -
Vvi16g0609 202 SMART PMEI_2 37 193 IPR006501 GO:0004857
Vvi16g0609 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 197 IPR035513 -
Vvi16g0609 202 FunFam Pectin methylesterase inhibitor 1 37 197 - -
Vvi16g0609 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 193 - -
Vvi16g0609 202 CDD PMEI-like_3 44 199 - -
Vvi16g0609 202 NCBIfam pectinesterase inhibitor domain 15 197 IPR006501 GO:0004857
Vvi16g0609 202 Pfam Plant invertase/pectin methylesterase inhibitor 41 192 IPR006501 GO:0004857
Vvi16g0609 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0609 Vvi-Chr16 12323891 12324499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0609 42 196 Carbohydrate Esterase AT1G53830 30.573 4.90e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0609 - - vvi:100244927 396.356