Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0516 ATGTGTTACTCTAGATACTTAAATTTGAGTAGTGGGGAACGCTCTTTCTCGACATTATGCTTTGCATTAGCTCTTCATGAGATGACAGAATCCCCATTCAGAGCAATGGATGAATTTGATGTGTTTATGGATGCAGTTAGCCGAAAGATCAGCTTTGTGGATTTTGCATTGGCACAAGGATCTCAATGGATTTTTATCACCCCTCATGATATCAGTATGGTTAAACAAGGGGAGGATAAAGAAGCAGCAAATGGCAGCCCCTCGTTCTTGATCGTTTCCATCCTCATTCTCTGTTGA 297 0.4108 MCYSRYLNLSSGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISFVDFALAQGSQWIFITPHDISMVKQGEDKEAANGSPSFLIVSILILC* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0516 98 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 8 79 - -
Vvi16g0516 98 Gene3D - 3 83 IPR027417 -
Vvi16g0516 98 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 76 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0516 9 78 Structural Maintenance of Chromosomes family AT5G61460 83.562 1.35e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0516 K22804 - rcu:8289618 132.109