Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0513 ATGATTTTGTGTCCTTGTGCATTATGGATATCTTTTATACCTAAAAAGCCTATGGGAACATTAACCAATACTTATTTCATACTTGATGAAAAATTACAGGAGAGTTGCAGGAAGGCTTCTATTATTTGTCCTGAAAGTAAGATTGAAGCTTTAGGAGGCTGTAAGAGGACCCCAGAGCAACTATGTGCCCAATTAAATAGGCTGAATCAGAGACTTCAAAGTGAAAGCCAGAGATATGCTGAACCTATTGAGGATCTTAGAATGATTTATGACAAAAAAGAGTACACAATTTTGAGAAAACAGCAAACTTATGAAGCTTTTAGAGAGAAATTGAATGCATGTAAGGAAGCCTTAGACCTACGATGGAGCAAGTTGCAGAGGAATGCCACTCTTCTGAAGCGCCAGTTGACTTGGCAATTTAATGCTCACTTAAGAAAGAAAGGGATTAGTGGGCACATTAAAGTTAGTTATGAAGAGAAAAACCCTATCAGTGGAGGTAAGTGA 504 0.375 MILCPCALWISFIPKKPMGTLTNTYFILDEKLQESCRKASIICPESKIEALGGCKRTPEQLCAQLNRLNQRLQSESQRYAEPIEDLRMIYDKKEYTILRKQQTYEAFREKLNACKEALDLRWSKLQRNATLLKRQLTWQFNAHLRKKGISGHIKVSYEEKNPISGGK* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0513 167 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 27 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0513 Vvi-Chr16 9914908 9918414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0513 24 160 Structural Maintenance of Chromosomes family AT5G61460 62.319 3.56e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0513 K22804 - vvi:109124166 276.559