Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0502 ATGTCCGATGAGCATGTAACTGGGTTGCAGCAAGTATCTTATAGCTGTGATAGTAAAGCAACTGGAAATGTGGATGAGACCTTTTTAGACAATGGAAGTCCTTGTGTATCTGATGGTAGTAAGTTGTTTGGGGCTGATATATTAGTTTCACTTCCACATTCAAGTACTCCGCCAAGCAGCTCGCCAAAAACTGAAATTTTAAACAACTCAAATGTGAAGGCACATACGACTGATCAAATCCGTCTCGTACCGAAGATGAATTGTCGTGTTGAGCCTATGCATTTTGGTACTGTATTGTTTTGTAAGCCATGGTGCAGTAAGCAGGCCATATACTCAAAAGGATTTACAACTCGTGTTAAATTCTTTAGTGTACATGATCCAACACGAGGGCATTACTATATTTCAGAGGTGCTGGATGCAGGGCTCCTTGAACCTCTATTTAAGGTTACTTCAGAAAGGCGCCCAAGTGGGACCTTTGCAAGTGTCTCTCCAAAAAAATACTGGGAAATGGTGCTGCGGAAAATGAAGACAAGAGCATTAACAACAATGAGCAACGAGGAGCTTATATGTTCAAGAAAATGGCCCTAA 588 0.4133 MSDEHVTGLQQVSYSCDSKATGNVDETFLDNGSPCVSDGSKLFGADILVSLPHSSTPPSSSPKTEILNNSNVKAHTTDQIRLVPKMNCRVEPMHFGTVLFCKPWCSKQAIYSKGFTTRVKFFSVHDPTRGHYYISEVLDAGLLEPLFKVTSERRPSGTFASVSPKKYWEMVLRKMKTRALTTMSNEELICSRKWP* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0502 195 SMART fyrn_3 96 140 IPR003888 GO:0005634
Vvi16g0502 195 Pfam F/Y-rich N-terminus 95 137 IPR003888 GO:0005634
Vvi16g0502 195 ProSiteProfiles FYR domain FYRN motif profile. 82 140 IPR003888 GO:0005634
Vvi16g0502 195 Gene3D - 89 192 - -
Vvi16g0502 195 Pfam F/Y rich C-terminus 144 177 IPR003889 GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0502 86 176 JUMONJI Transcription Factor Family AT1G30810 53.846 3.83e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0502 - - vvi:100252938 248.44