Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0472 ATGATCACAGCGTCATTCATAAATGCGCTGAGATATAAAATGTTATCTCTAAAGGAGCAATCTTTTTCTTCTTCACCGAATATCTCCAAGAAAAGTTGCACACACACAGGGCTTAATGATGTCTCTAGCAGAAGCCATGGAGTCCTTGTGGTATCTGTTTCCACTCCTTGTGATGATGGCTCCGATGCTGTTGTTACTTGGAAGTTGAACCTCATCGATTTAGCAGGTAATGAAGACAACAGAAGAACCTGCAATGAAGGGATACGTCTCCAAGAGAGAGCTAAGATCAACCAGTCCTTATTTGTCTTATCAAATGTGGTTTATGCCTTTAACAATAACAAGCCCCGAGTACCATACAGAGAAAATAAACTGACCCGGATACTGCAAGATTCCCTTGGAGGAACCAGCCGTGCATTGATGGTTGCTTGTCTGAATCCAGGAGAGTACCAAGAATCTGTTCATACGGTCAGCTTGGCTGCACGGTCGCGCCACATATCTAACTCTGTTCCATCAGCTCAAAAACAAGATACTCCAAATGTTAAAGTTGACATGGAGGCGAAATTGCGTGCCTGGCTTGAATCAAAAGGAAAGACAAAGAGTGCAGAAAGAATGAGGGCACTTGGTTCATCTCTTATGAGCAAAGCTCCTAATTCTTTGAGCTCTTTGAAGAAGCCCTGTCCATGTCACAGCTCCACAAAGGCAAAGGCTATTACAAACCAAGGTGCTTCTAATGCTAAAGAAAGGGTTCTTTCTGTGCAGCACAGAAATTTATTCTACAATGGAGATTCAGTTGATTCTGGCACAGAGCGTTTCAACTTTGCTGCTGAGAACAATACCAACAATACAGAAGAAGAGTTCAAGGCTGGTGGGGATGGGAGTGCCTCAGAAACAAATACAATTTTACCTGATGATGCATTGGCAAATGACAAGAAGATTCTGAAGCTGTATACTTGGAAGCTTCAGTTTTTAAGGCTCTGTTTCCTTTCATATACTGGGATCCATTACCCAGCATAG 1014 0.425 MITASFINALRYKMLSLKEQSFSSSPNISKKSCTHTGLNDVSSRSHGVLVVSVSTPCDDGSDAVVTWKLNLIDLAGNEDNRRTCNEGIRLQERAKINQSLFVLSNVVYAFNNNKPRVPYRENKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHISNSVPSAQKQDTPNVKVDMEAKLRAWLESKGKTKSAERMRALGSSLMSKAPNSLSSLKKPCPCHSSTKAKAITNQGASNAKERVLSVQHRNLFYNGDSVDSGTERFNFAAENNTNNTEEEFKAGGDGSASETNTILPDDALANDKKILKLYTWKLQFLRLCFLSYTGIHYPA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0472 337 Gene3D Kinesin motor domain 23 207 IPR036961 -
Vvi16g0472 337 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 33 232 IPR027640 GO:0003777|GO:0007018
Vvi16g0472 337 Pfam Kinesin motor domain 29 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0472 337 PRINTS Kinesin heavy chain signature 68 86 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0472 337 PRINTS Kinesin heavy chain signature 36 53 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0472 337 PRINTS Kinesin heavy chain signature 117 138 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0472 337 ProSiteProfiles Kinesin motor domain profile. 1 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi16g0472 337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 194 IPR027417 -
Vvi16g0472 337 SMART kinesin_4 3 173 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0472 Vvi-Chr16 8501929 8503556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0472 30 204 Calmodulin-binding Proteins AT5G65930 32.203 1.04e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0472 K10403 - vvi:104877678 582.022