Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g0438 | ATGTCTGAGGTCCATTTTGTTTTAGCAATTGTGTTGTCCAAGGTAAGTGCTGCCAGTGCTTGTGAAGATTATAAAGCTCTCAAGCTCTCAAGATACTCCTATGCTGATATTAAGAAGATTACAAATCACTTCAAGGAAAAATTGGGTCAAGGCGGATATGGAACTTTGTATAAAGGAAAGCTTTCTAGTGACGTTCTTGTTGCAGTAAAGATCCTAAACAATTCAAAAGAAAATGGAGAAGAGTTCATTAATGAAGTGGCAACAATGGGTAGGATCCATCATGTCAATGTGTTAGATAAGGGAGAAGAGGTGTGTATTCGAATTGAGGAAGAGGGAGACACCTCAATTGCAAAGAAGTTAACAATTGTGGGACTTTGTTGCATTCAATGGCATCTAATAGATTGCCCTTTTATGAAAGTTGTGATTCAAATGTTGGAAGGAGGAGGAGACAATTTAACCATGCCATCCAACCCTTTTGCTTCTATAGATTCAACAAGAATAAACATCAGAAGGTGTAAAAGATCTCTTCAACAAGAGTTGGCAGTCATCTCAAAATTAATAGAGTGA | 567 | 0.3739 | MSEVHFVLAIVLSKVSAASACEDYKALKLSRYSYADIKKITNHFKEKLGQGGYGTLYKGKLSSDVLVAVKILNNSKENGEEFINEVATMGRIHHVNVLDKGEEVCIRIEEEGDTSIAKKLTIVGLCCIQWHLIDCPFMKVVIQMLEGGGDNLTMPSNPFASIDSTRINIRRCKRSLQQELAVISKLIE* | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g0438 | 188 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 27 | 98 | IPR045874 | GO:0004672 | |
Vvi16g0438 | 188 | ProSitePatterns | Protein kinases ATP-binding region signature. | 48 | 70 | IPR017441 | GO:0005524 | |
Vvi16g0438 | 188 | Pfam | Protein tyrosine and serine/threonine kinase | 43 | 99 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi16g0438 | 188 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 100 | - | - | |
Vvi16g0438 | 188 | SUPERFAMILY | Protein kinase-like (PK-like) | 30 | 98 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi16g0438 | Vvi-Chr16 | 7738618 | 7750823 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi16g0438 | 27 | 98 | Receptor kinase-like Gene Family | AT1G66980 | 52.778 | 1.01e-20 | 87.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Vvi16g0438 | PK_Tyr_Ser-Thr | 4e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g0438 | - | - | vvi:100247801 | 150.214 |