Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0433 ATGAAGGGTAGTCCTGAAATGCTTGCAAATCTGCATGGTTCACCAATTGAGTCTGGGAATTCTGACAGATCTTCAGGAATGGATGACGAGTCCAATAACCGCGAGGTGAATTCTAATTTAGAAGTTCCTAATGCAAATGCTGGTCATGCTAATGCTCTGCATGCTAGCGCTAATGTTGATATGAATGGTGCTAGTCTTGAAGATCAAATTGAGCCAACTGGCCCGGTTTCTAAATATGGCACGGGTAAAACAGAAAGTGAAAAAAAATTGCTTATGCGTTATCTCGCCTACATGGGAGGGAGATCTGTAGCTAAGGGAAGGACTATTGAGCAACAAATTCTTGAGTCCAATCTGGTTCTAGAAGCATTCGGTGATGCAAAGACTGTCAGAAACAATAATTCAAGTCGGTTTGGTAAGTTTGTGGAGATTCAATTTGATCAGAGGAGAAGGATTTCAAGAGCAACTATCAGGACTTATTTGCCGGAAAGATCCTGTGTTTGTCAAGTGCTTAATCCTGAGAAATTATCATTGCTTCTACATGAAAAGGTCCAGATTGGGAAATGCAGGAAGTTTCCATTATCTGAATCAATCTAA 594 0.4057 MKGSPEMLANLHGSPIESGNSDRSSGMDDESNNREVNSNLEVPNANAGHANALHASANVDMNGASLEDQIEPTGPVSKYGTGKTESEKKLLMRYLAYMGGRSVAKGRTIEQQILESNLVLEAFGDAKTVRNNNSSRFGKFVEIQFDQRRRISRATIRTYLPERSCVCQVLNPEKLSLLLHEKVQIGKCRKFPLSESI* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0433 197 PANTHER MYOSIN 80 174 - -
Vvi16g0433 197 Pfam Myosin head (motor domain) 79 173 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g0433 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 174 IPR027417 -
Vvi16g0433 197 Gene3D Kinesin motor domain 49 192 IPR036961 -
Vvi16g0433 197 ProSiteProfiles Myosin motor domain profile. 1 197 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g0433 197 MobiDBLite consensus disorder prediction 1 41 - -
Vvi16g0433 197 PRINTS Myosin heavy chain signature 118 145 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g0433 197 PRINTS Myosin heavy chain signature 70 95 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0433 Vvi-Chr16 7633265 7634427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0433 80 174 Myosins gene family AT5G43900 76.842 5.09e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0433 K10357 - vvi:100256590 150.599