Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0429 ATGGATGATGAGTCCAATAATTGTGAGATGGTGAATTCTGGTTTAGAAATCCCCAACGCAGGCCCATCCATTGATGGGAACTCCATGTATGATGACATTATTGGGAACGATCTCCTTTCCGATTACAAATGTGGTGAACCAAGTATGTTGTTTAGTGTCGCTGATACGTTAAACAGAGCCATCACAATGCCTGGTTTAGGGAAGCAGTTGAGGCATGGGAAGCGCTATCGGTATGTCAGCTCTCATGATGTGGTACATTGGACACGTAGTTTTATGTCGGATTTGAAGCGGGCATGCAAAGATCACTACAGTAAACGTTGCTGGAGCACTGGTTTTAGCCTGAGTTTCAGAATTGTTGCTCTTTCTCCCAGTTTTAAGAATCTTTCCTTGGACCATTTTGTCAAAACATATAAGAGGGCGAATAGAAGGGCGACGCTTCTGGACCATGATGGGACTGTAGTTCTGCAATCTTCCATTGTTAAAACTCCTGGGCCTTGA 498 0.4398 MDDESNNCEMVNSGLEIPNAGPSIDGNSMYDDIIGNDLLSDYKCGEPSMLFSVADTLNRAITMPGLGKQLRHGKRYRYVSSHDVVHWTRSFMSDLKRACKDHYSKRCWSTGFSLSFRIVALSPSFKNLSLDHFVKTYKRANRRATLLDHDGTVVLQSSIVKTPGP* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0429 165 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 52 100 - -
Vvi16g0429 165 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 51 162 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0429 Vvi-Chr16 7479941 7480935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0429 52 163 Trehalose Biosynthesis Gene Families AT1G23870 58.929 7.88e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0429 K16055 - vvi:100251811 186.422