Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0397 ATGTTGAAAATATTCCAAGTTGTGCCTACACAATGTCCCATTATTCCAAATGCATATTCTGTTGCCTCCTGTGCACTATGTCTTTACTTGTTAGTGACCATTCTGGTGGCAACACCAGAGAGGGTAGAAAGAGCTTGGTTTTTAGCTTTTATTGAGTATCATTTCAAGTTTTTATTGACTCCACTCTTCTTTGTGGTTCCCATTCTTCTTAAGGAATCCGACTTCCTGTCACTTCATAACTTCAAAATAGCAATGTCAAGCATGCAAAGGCAGCCAAAGATGGAATATTTAGAAGGTATAAAGGTTTTCTTCCATAGTTGTACATTTCTTGCTTGTCAATTGTCATTAATTCTTATTTATTTCTTTGTTTTTTCTTTTACTTGTTTACTGTTTAGTTCTATATGA 405 0.3457 MLKIFQVVPTQCPIIPNAYSVASCALCLYLLVTILVATPERVERAWFLAFIEYHFKFLLTPLFFVVPILLKESDFLSLHNFKIAMSSMQRQPKMEYLEGIKVFFHSCTFLACQLSLILIYFFVFSFTCLLFSSI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0397 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0397 Vvi-Chr16 6844258 6844791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0397 63 103 Core DNA Replication Machinery Family AT2G01120 51.220 9.75e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0397 - - vvi:100249124 51.2174