Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0396 ATGCGTGGTTCCAAAGCTATTCTCAATTTCCCTCTTGAAGCTGATAATTGGTCGGGTTCTGACCCACCAGCGACATCTGGCCGGAAAAGGGAGAGAGACATTGAGACTGAAGAGAGACAACAAGTGGAGATTAAGGTTCTAAAGCAAGAAGAGCACTTGCCGGAATCTGACTGCACACTGGCGCCAGCCAGTAATGTATTGGGGGTTTGTCCCTTAACCCCGTCAAATTGGAGGGCCGTCTGGGAGGAGGGAGACATGGAGGGAATGTTCCATCTGCCACCGTTAACGCCGTTATCACCCCATCCTTGGATAGCATATTCTCAGCTTATTGTCTGA 336 0.5 MRGSKAILNFPLEADNWSGSDPPATSGRKRERDIETEERQQVEIKVLKQEEHLPESDCTLAPASNVLGVCPLTPSNWRAVWEEGDMEGMFHLPPLTPLSPHPWIAYSQLIV* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0396 111 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0396 Vvi-Chr16 6813595 6813930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0396 1 111 AP2-EREBP Transcription Factor Family AT5G51190 38.793 9.48e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0396 K09286 - vvi:100240781 224.557