Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0381 ATGCCAGGCATACCTTTAGTGGCTCGTGAAACAATCTATTCTAGAAGTGCAGATCAGATGTGCCGCCAAGATTCTCGTGTGCACTTATCTGCAGAGGAGGAAATTGCAGCAGAAGAGTCTTTATCCATTTACTGCAAGCCTGTCGAACTTTATAACATTCTTCAACGACGTGCTGTAGGAAATCCATCATTTCTTCAAAGATGTTTGCGATACAAAATACAAGCAAAGCACAAAAGAAGGATTCAAATGACAATTTCTCTACCAGGGTCTACATATGATGGAGTACAAGCTCAGAGTCCATTTCCTTTGTATATCTTGTTAGCAAGACCAATATCTGACATTGCACTTGCAGAGTACCCTGCAGTTTATCGGTTCAATCGAGCATGCATTTTGACCAGTTCAACCAGAGTTGATGGTAGTCATCAAGCTCAAGCAAATTTTATTCTCCCTGATATTAGTAAGCTAGCAATGGAATCCAAATCTGGGTCACTAACAATCTTGATTGTTAAGTGTGCTGAAAGCAAGGAGTCAATTAGTGGATTTGGTTTACCCAAGGACATTATGGACATGGCACCTTTTTCAACAAATGTTGGAGGACACTGCCTGTGGGGCAAGGTACCAATGGAATCGCTCTATTTGTCATGGAAAATGTCTCCAAACCTGAGTTTAGGGCAGAGAGCTGAGATCATATCAACTGTTGACTTGCATCCATGCTTCATGAAGTCAAGTTGTTTGGACGACGACAAGTGCATTTCTTTTCAAAATCCTTATAATTCTGGGACTCTGAGTAAAGCCCAGCAATTTCAAGTTATCATTTCTGCGGAAGAGGTTGGGGCCAAAGATAAATCCCCTTACAATTCATACACATACACTGACGTTCCTACTTCATCATTATCTGATATTATTCGGTTGAGAACTGGAAACGTCATTTTCAACTATAGGTACTACAATAATAAGTTGCAAAGAACCGAAGTGACGGAAGACTTCTCCTGTCCCTTCTGCTTGGTCAAATGTGCAAGCTTCAAGGGTCTGAGATATCACTTGTCCTCATCACATGATCTATTCAACTTTGAGTTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTATCTGTGAAAACTGATATTTGGAGAACCGAGATTGTTGCAGATGGAGTTGACCCTAAGCAACAAACTTTTTCCTTCTGTTCAAAGCCACTAAGACGAAGAAGATCGAAGAATCTAGCTCAAAATGCAAAGCATGTACATCCACTCACCCTGGAGTCAGACTTGCATGCTGTAGTCAGTAATCTGGGGAAGGCAAATGATGCTCATTCCAGTAAAGGTGAAAGGGCTCGTATTTTAAGTGGGAATGATTCACAGGCTGTCCCAGGTGCTGCGCTGTGTGTGGAACGAGTTTTGTCAAGTCATAATGTTCCAGGGGTTTCAAGTGCAACAGTTCAATCAAATGCAGATCCAGAATGTGTTCAATCAGGCCCTGCAAGCAATCTTGCACCACCTGCCTTGCTACAGTTTGCAAAGACAAGAAAGTTGTCAATCGAACGCTCTGACCCTAGAAGCCGTGCACTCCTGCAGAAACGACAGTTCTTTCACTCGCATAGAGCTCAGCCGATGGGCATGGAACAAGTATTATCTGATCGGGATAGTGAAGATGAAGTTGATGATGATGTTGCAGATTTTGAAGACCGAAGGATGCTTGATGATTTTGTGGATGTGACTAAAGATGAGAAGCAACTAATGCATCTATGGAACTCTTTTGTAAGGAAGCAACGGGTGTTAGCAGATGGGCACATTCCTTGGGCATGTGAGGCATTTTCAAGATTGCATGGACATGATCTTGCCCAGGCCCCAGCGCTGAGTTGGTGTTGGAGATTATTCATGATCAAACTGTGGAATCACGGTCTCCTCGATGCACGCGCCATGAACAATTGTAATAAAATTATCGAACAGTGCAACAAAAACCAGGATTCGGATCCTAAAACAAGCTAA 1989 0.4233 MPGIPLVARETIYSRSADQMCRQDSRVHLSAEEEIAAEESLSIYCKPVELYNILQRRAVGNPSFLQRCLRYKIQAKHKRRIQMTISLPGSTYDGVQAQSPFPLYILLARPISDIALAEYPAVYRFNRACILTSSTRVDGSHQAQANFILPDISKLAMESKSGSLTILIVKCAESKESISGFGLPKDIMDMAPFSTNVGGHCLWGKVPMESLYLSWKMSPNLSLGQRAEIISTVDLHPCFMKSSCLDDDKCISFQNPYNSGTLSKAQQFQVIISAEEVGAKDKSPYNSYTYTDVPTSSLSDIIRLRTGNVIFNYRYYNNKLQRTEVTEDFSCPFCLVKCASFKGLRYHLSSSHDLFNFEFWVTEEYQAVNVSVKTDIWRTEIVADGVDPKQQTFSFCSKPLRRRRSKNLAQNAKHVHPLTLESDLHAVVSNLGKANDAHSSKGERARILSGNDSQAVPGAALCVERVLSSHNVPGVSSATVQSNADPECVQSGPASNLAPPALLQFAKTRKLSIERSDPRSRALLQKRQFFHSHRAQPMGMEQVLSDRDSEDEVDDDVADFEDRRMLDDFVDVTKDEKQLMHLWNSFVRKQRVLADGHIPWACEAFSRLHGHDLAQAPALSWCWRLFMIKLWNHGLLDARAMNNCNKIIEQCNKNQDSDPKTS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0381 662 MobiDBLite consensus disorder prediction 474 490 - -
Vvi16g0381 662 PANTHER POLYCOMB GROUP PROTEIN 28 661 - -
Vvi16g0381 662 MobiDBLite consensus disorder prediction 474 495 - -
Vvi16g0381 662 CDD VEFS-box_EMF2-like 524 650 - -
Vvi16g0381 662 Pfam VEFS-Box of polycomb protein 511 646 IPR019135 -
Vvi16g0381 662 CDD ZnB-Zn_EMF2-like 303 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0381 Vvi-Chr16 6368743 6435322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0381 1 650 C2H2 Transcription Factor Family AT5G51230 63.497 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0381 - - vvi:100252876 1309.28