Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0350 ATGGGAGATTCTACGGTTTTCACCCAACCCCTCTCGGCATCTCATAGATCTTCTGCTGGCATCATCTTAAAGATCCGATTGGAGAACTTCATGTGCCACAGTAGCTTGCAAATCGAGCTCGGCGAGTGGCTCAATTTCGTCACTGGTCAAAATGGAAGTGGTAAGAGCGCGATATTGACTGCGTTGTGCGTTGCGTTCGGGTCCCGAGCTAAAGAAACGCAAAGGGCGACCACGTTGAAGGAGTTCATCAAAACTGGTTGCAGTTATGCGGTTATTCAAGTGGAAATAAAAAATGAAGGGGAGGACGCCTTTAAGCCAGAGATATATGGTGATGTCATAATTGTGGAACGTCGGATTTCTGTATCTACCAGCTCCACTGTTTTGAAGGATCACCAAGATGGCTCATTGGAGTACATCTGA 420 0.4667 MGDSTVFTQPLSASHRSSAGIILKIRLENFMCHSSLQIELGEWLNFVTGQNGSGKSAILTALCVAFGSRAKETQRATTLKEFIKTGCSYAVIQVEIKNEGEDAFKPEIYGDVIIVERRISVSTSSTVLKDHQDGSLEYI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0350 139 Pfam AAA domain 24 126 IPR038729 GO:0006302|GO:0016887
Vvi16g0350 139 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 6 132 - -
Vvi16g0350 139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 132 IPR027417 -
Vvi16g0350 139 Gene3D - 21 139 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0350 14 132 Structural Maintenance of Chromosomes family AT5G07660 76.471 5.20e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0350 K22804 - vvi:100249449 260.381