Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0276 ATGAAGAGGAGGTTGGCAACTACTGAATCTAAATCTGAAAATAATGGTGTCAAATTAGAGAAGATTGTGAGATTTGAAGCGGCCCCGGCACCTGTGGAGGCTGGAACTGAAGCAGAAAGTGCTTTGTTGCATGACAAGGAGAATGGGAAATTCGATCAAGAACCTGGAGTTACCGAGCCCATAAAATTTGGTTCTCATGGAGATGAGCCTGTCAAAGGGAAGGGTCCAGTTCTAGGAGCATTTGGTAATGCAAAGACTGTCAGAAACAATAATTCAAGTCGGTTTGGTAAGTTTGTGGAGATTCAATTTGATCAGAGGGGAATGATTTCAAGAGCAGATATCAGGACTTATTTGCTGGAAACAAAGCTATGTTTGCTTGAAGGGGGTCGCTCAGCTTTCTCACTGGAGGTCACTTGGAGCACTGCTCAAAAGAACTTGGGTTTCATCCTGTCAAATTGCTGGATATAG 468 0.4338 MKRRLATTESKSENNGVKLEKIVRFEAAPAPVEAGTEAESALLHDKENGKFDQEPGVTEPIKFGSHGDEPVKGKGPVLGAFGNAKTVRNNNSSRFGKFVEIQFDQRGMISRADIRTYLLETKLCLLEGGRSAFSLEVTWSTAQKNLGFILSNCWI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0276 155 Pfam Myosin head (motor domain) 75 121 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g0276 155 Gene3D Kinesin motor domain 64 127 IPR036961 -
Vvi16g0276 155 MobiDBLite consensus disorder prediction 30 70 - -
Vvi16g0276 155 MobiDBLite consensus disorder prediction 39 53 - -
Vvi16g0276 155 ProSiteProfiles Myosin motor domain profile. 1 155 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g0276 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 121 IPR027417 -
Vvi16g0276 155 PANTHER MYOSIN 75 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0276 Vvi-Chr16 4406293 4407303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0276 64 124 Myosins gene family AT1G04600 70.968 3.12e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0276 K10357 - vvi:100267528 104.76