Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0178 ATGCAGTTGATGAGCTGTTGGAATGCAACTCTTGCTTTGCCAATTGTACTAATTCGCTTGAAACAAAGTGGCGAGCGAGAGGACCACCCCGTTTTATCAGCTGTCGCTGCTGCTACTGCTGCCCGAAGCATTCTGCGTCCTCAAAGTTCTTCTTCTGGTGGTGATTCTAAAGGAAAAAGTAAACCTGCTGATAGAAGTTTAAGGAGTCGGAATCTGAAGCATGACGTTATAGAAGCAGTTAATGAATTTATTCAAGATATCACCACTTGCCATGACCAGATTTTTGAACAAGCAGTGGAGTATATTCATCAAAATGAGAGGGCACTCCAAATGGTACCTCAGAAAAGGTCAAAAGTGATTCAAAGCAAAGGCTTGAAAATGATATAA 387 0.416 MQLMSCWNATLALPIVLIRLKQSGEREDHPVLSAVAAATAARSILRPQSSSSGGDSKGKSKPADRSLRSRNLKHDVIEAVNEFIQDITTCHDQIFEQAVEYIHQNERALQMVPQKRSKVIQSKGLKMI* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0178 128 MobiDBLite consensus disorder prediction 44 71 - -
Vvi16g0178 128 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 22 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0178 Vvi-Chr16 2469223 2469609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0178 47 111 Eukaryotic Initiation Factors Gene Family AT3G07300 61.538 3.22e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0178 K03754 - vvi:100256712 113.235