Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0129 ATGACACAATTTTCGATGGTAGACCTGAAGATCTCCCATCGGCCAATCATATCTTACAGGCCCATACGGCCCTCTGATCTGGATGTTCTTGAGCAAATCCATGGCGATGTGTTTCCTATCAGATATGAATCTGAGTTCTTCCAAAATGTTGTCAATGGACGGGATATTGTGTCTTGGGGAGCTGTTGACCGCAATCGTTCTAATGGTGAAAGTGATGAAATTATTGGATTTGTTACAGCACGGCTTGTTCTAGCAAATGAAAGTGAGATAGGGGATATGCTCCAATGTGACTCATCAAAATCTGGTCAAACTCTAGTCTACATTCTGACACTGGGAGTAGAGGAAACTTACAGAAATCTTGGCATAGCTTCTACACTTATTCGGGAGGTTATCAAATATGCTTCAAGTATTCCTACATGCCGAGGAGTTTATTTGCACGTTATTAGTTACAACAATCCTGCCATTCATTTTTATAAGAAAATGTTATTCAAGTGTGTGCGAAGGCTGCATGATTTTTACTTCATCAATGGTCAGCATTATGATTCATACTTATTCGTTTACTATGTAAATGGCGGTCGATCTCCATGCTCACCATTAGAGCTTGTCACGGTTGTTGTGACATGCATGAGGAACGGGCTTAAGTCAGTGGCTGCAAGGCTATGGAAGAATGACGATAAATCGCCAAAATGGTCCAAATGTAAAGAAAGTTGGGGCCTTATGAGGACAACACAATCGAAGAGAGTCCTCACACCCGAGGGTAGTGGGTGTGAGTGTGTTTAG 780 0.4192 MTQFSMVDLKISHRPIISYRPIRPSDLDVLEQIHGDVFPIRYESEFFQNVVNGRDIVSWGAVDRNRSNGESDEIIGFVTARLVLANESEIGDMLQCDSSKSGQTLVYILTLGVEETYRNLGIASTLIREVIKYASSIPTCRGVYLHVISYNNPAIHFYKKMLFKCVRRLHDFYFINGQHYDSYLFVYYVNGGRSPCSPLELVTVVVTCMRNGLKSVAARLWKNDDKSPKWSKCKESWGLMRTTQSKRVLTPEGSGCECV* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0129 259 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 19 187 IPR016181 -
Vvi16g0129 259 Pfam Acetyltransferase (GNAT) family 65 161 IPR000182 GO:0016747
Vvi16g0129 259 Gene3D - 11 192 - -
Vvi16g0129 259 FunFam Histone acetyltransferase MCC1 isoform A 11 192 - -
Vvi16g0129 259 CDD NAT_SF 82 146 - -
Vvi16g0129 259 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 187 IPR000182 GO:0016747
Vvi16g0129 259 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 6 245 IPR045141 GO:0004596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi16g0129 Acetyltransf_1 9.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0129 K22767 - vvi:100259634 532.717