Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0102 ATGGACCGTGCCGAGCTCACTACTGACCAGGTTCTGAAGAGGGACATCCCATGGGAGACGTACATGACTACGAAGCTAATAACTGGAACATGTCTTCAGCTGTTGAGGCGTTACGATAACAGATCTGAGAGTCAAAGAGCTGTATTGCTTGATGATGATGGTCCTGCTTATGTTAGGGTGTTTGTGAGCATTTTACGTGATATATTCAAGGAAGAAACAGTTGAATATGTGCTGGCACTGATTGATGAAATGCTAACTGCAAATCCAAAAAGAGCCAAACTATTCCATGATAAGTCTCTTGCTAATGAAGATACTTATGAACCTTTCTTAATTTGTAGAGTTAACATTTGGTATGGTGTTCAGACTTTTTTATGTTGCCTAGAAGCTCCTAGGCCACAGAAAGTCAAAATTATGTTATGCAAACAATTGCTTTGGAAAGGTAATTGGTTCGTACAAGAGAAGAGCTGTAAGATTCTGGCTCTGATAGTGAGTGCGAGGCCCAAAACCCAGGATGGTGTTCTTTCTAATGGGGAATCCTCAAACTCAAAGAAGAAATTCGTTACTATTGACGATGTGTTGAGAGGATTGGTGGAATGGCTTTGTGCACAGCTAAAGAAGCCTTCACATCCTACCCGTGGCATTGCCATTGCTATCAGTTGCCTTGCAACATTACTGAAGGAACCCTTGGTCAGATCTTCCTTTGTTCAAGCAGATGGGGTGAAGTTGCTTATCCCTTTAATTTCTCCAGCATCCACTCAGCAATCTATCCAGCTACTTTATGAAACTTGTCTTTGTGTTTGGCTCTTATCTTATTATGAACCTGCAATCGAGTACTTGGCTACTTCTAGAACCCTACCACGACTAGTAGAGGTTGTTAAGAGTTCAACAAAAGAAAAGGTTGTCAGGGTTGTTGTCTTGACCCTTAAGAACTTGCTTTCAAAGGGGGCGTTTGGTGCTCAGATGGTAGACCTTGGACTGCTGCAAATTGTTCAGAGTCTGAAAGCACAGGCATGGAGTGATGAGGACCTGATGGAGGCTCTGAATCAACTAGATGAAGGGCTGAAAGCTAACATTAAGAAATTGAGCTCGTTTGATAAGTACAAACAAGAAGTCCTCCTTGGCCATCTCGACTGGACCCCTGTTCACAAAGATCCCATGTTCTGGCGTGATAACATTAGTAACTTTGAAGAGAATGATTTCCAGATTCTTAGGGTCCTCATTACAATTTTGGACACGTCCAGTGACCCAAGGGCGCTGGCTGTAGCGTGCTTTGATCTGTCACAGTTCATTCAATACCATCCAGCAGGGAGGGTCATTGTAAACGATCTCAAGGCGAAGGAGCGGGTGATGAAACTGATGAACCATGAGAATGCAGAGGTTACCAAAAACTCCCTCCTCTGTATCCAAAGGCTCTTCCTAGGTGCCAAGTACGCGAGCTTTTTGCAGGCTTAA 1452 0.4339 MDRAELTTDQVLKRDIPWETYMTTKLITGTCLQLLRRYDNRSESQRAVLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRAKLFHDKSLANEDTYEPFLICRVNIWYGVQTFLCCLEAPRPQKVKIMLCKQLLWKGNWFVQEKSCKILALIVSARPKTQDGVLSNGESSNSKKKFVTIDDVLRGLVEWLCAQLKKPSHPTRGIAIAISCLATLLKEPLVRSSFVQADGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEYLATSRTLPRLVEVVKSSTKEKVVRVVVLTLKNLLSKGAFGAQMVDLGLLQIVQSLKAQAWSDEDLMEALNQLDEGLKANIKKLSSFDKYKQEVLLGHLDWTPVHKDPMFWRDNISNFEENDFQILRVLITILDTSSDPRALAVACFDLSQFIQYHPAGRVIVNDLKAKERVMKLMNHENAEVTKNSLLCIQRLFLGAKYASFLQA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0102 483 SMART arm_5 272 313 IPR000225 GO:0005515
Vvi16g0102 483 SMART arm_5 226 271 IPR000225 GO:0005515
Vvi16g0102 483 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 482 IPR004908 GO:0000221|GO:0046961|GO:1902600
Vvi16g0102 483 Pfam V-ATPase subunit H 360 472 IPR011987 GO:0000221|GO:1902600
Vvi16g0102 483 SUPERFAMILY ARM repeat 8 473 IPR016024 -
Vvi16g0102 483 PIRSF V-ATP_synth_H 1 116 IPR004908 GO:0000221|GO:0046961|GO:1902600
Vvi16g0102 483 PIRSF V-ATP_synth_H 121 482 IPR004908 GO:0000221|GO:0046961|GO:1902600
Vvi16g0102 483 FunFam V-type proton ATPase subunit H 374 475 - -
Vvi16g0102 483 Gene3D - 374 475 IPR038497 -
Vvi16g0102 483 Gene3D - 5 362 IPR011989 -
Vvi16g0102 483 Pfam V-ATPase subunit H 5 354 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0102 1 483 Primary Pumps ATPases(2) AT3G42050 74.948 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0102 K02144 - vvi:100240790 846.269