Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0083 ATGTTAAAATACGCTTTTGATCTTCCATCTTGTAGGAGGAATAACACGGAAGAACGGACTGGTGAAAACTTGGCTCATGATTTGTCAGAACTGAAGAGATTGCAAAAGTGCTGGAGCACTACAGTTCTGTGCCTATATGAAGCTGGAAAGTATAATAAAATCCAATTGTTAGACTTGTTTTGTGAGGCAGTTGTTCCATGTTTGGGCAACTCAACAGCTTCTAATCATCACTTGGGTTCTGGAATATCATCTTCTAGTGATCACTCTATTCATCACCAATATCTGATCTCGGAAAAGTGCAGTTTTATCTGTCAAGCAATACGCAAGGTGAGGGATCTCCCAGTTGTGCTACTTTATCAATTGCTTAAGAGCTGGGAAAAACTCACAGAGGATGTCATTGAGATTCATGACAAAGTGAAGGAACTCCAATCGCTGCTGAAATTTGAGAATGGCAAGAGTTTGAAACAAGATTTGACAAATATACCCAAGAGACATACATCTCGGAGTCATTTAAATATGGATAAGGACTCAAAAGTGTTAAATGAGAAAGCTGCTAGGTTGATGGAGACCATGGTTAGGGATTACATGCAGCCTGTTGAGTGCATACCTTTTCACGAAATAGTGTGTTTTAAGAATGTTGACAAACTACAATCAGCTTTAATGGGAGATCCAAGAAGAAGAATTCAACTTGATCTTCTGGAGTTCCAAAAAATCCTTCTTTGTAGTTGCTGCAGCAATAGTAGTAAAGCGATATTACCATCTATGCACGACACTTCAATTCTGTATACCCTGGCTCAGGAGCATGGTGATCTTATCAATCTCCATGATTGGTACCAGTCTTTCAAATCAACTGTCTTTCAGCCAAGTACCAAAGGGAAACACAAGCTGAAGCAGTCCCCAGCTAAGAAAAGAAAGGACACAAATGAATCTCAAAACCAGAGTGAAGCATCGATTCAAGTGCGATTCTGCAGGGCAGTCACAGAGCTCCAGATTACTGGCCTGCTACGGATGCCCAGCAAAAGACGGCCAGATTATGTGCAGAGGGTAGCATTCGGATTGTAA 1062 0.4087 MLKYAFDLPSCRRNNTEERTGENLAHDLSELKRLQKCWSTTVLCLYEAGKYNKIQLLDLFCEAVVPCLGNSTASNHHLGSGISSSSDHSIHHQYLISEKCSFICQAIRKVRDLPVVLLYQLLKSWEKLTEDVIEIHDKVKELQSLLKFENGKSLKQDLTNIPKRHTSRSHLNMDKDSKVLNEKAARLMETMVRDYMQPVECIPFHEIVCFKNVDKLQSALMGDPRRRIQLDLLEFQKILLCSCCSNSSKAILPSMHDTSILYTLAQEHGDLINLHDWYQSFKSTVFQPSTKGKHKLKQSPAKKRKDTNESQNQSEASIQVRFCRAVTELQITGLLRMPSKRRPDYVQRVAFGL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0083 353 Pfam Origin recognition complex winged helix C-terminal 225 351 IPR040855 -
Vvi16g0083 353 MobiDBLite consensus disorder prediction 289 315 - -
Vvi16g0083 353 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 2 352 IPR020795 GO:0003677|GO:0005664|GO:0006260
Vvi16g0083 353 CDD Orc3 195 351 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0083 2 285 Core DNA Replication Machinery Family AT5G16690 51.056 2.78e-91 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0083 K02605 - vvi:100245976 691.804