Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0074 ATGGATGCAACGAACTGCCATGGAAGCAACAAGGTGGAGAGTTTCTGCGTGAGTGATCCGCTGAACTGGGGAATGGCTGCGGAGACGTTGAAGGGAAGCCATTTGGATGAAGTGAAGCGCATGGTGGCGGAGTACCGGAAGCCGGTTGTTCGGCTCGGTGGTGAGACGCTTACCATATCGCAGGTGGCGGCTATCGCCGGGCGGGAGGGGGATGTGAATGTGGAGTTGTCGGAGACGGCGAGAGCGGGCGTGAACGCGAGCAGCGAGTGGGTGATGGAGAGCATGAGCAAAGGCACCGACAGCTATGGTGTCACCACTGGGTTTGGTGCTACTTCACATAGGAGAACCAAACAAGGTGGTGCCCTTCAGAAGGAGCTCATCAGGTAA 387 0.5736 MDATNCHGSNKVESFCVSDPLNWGMAAETLKGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAIAGREGDVNVELSETARAGVNASSEWVMESMSKGTDSYGVTTGFGATSHRRTKQGGALQKELIR* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0074 128 PANTHER HISTIDINE AMMONIA-LYASE 11 128 IPR001106 -
Vvi16g0074 128 Pfam Aromatic amino acid lyase 57 128 IPR001106 -
Vvi16g0074 128 SUPERFAMILY L-aspartase-like 19 128 IPR008948 GO:0003824
Vvi16g0074 128 Gene3D - 10 128 IPR024083 -
Vvi16g0074 128 MobiDBLite consensus disorder prediction 106 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0074 Vvi-Chr16 724104 724490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0074 1 128 Monolignol Biosynthesis Gene Families AT2G37040 75.385 6.85e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0074 K10775 - vvi:104881994 257.299