Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0066 ATGTCTACTACTATTGATCAGACGAAGAATGCTATGAAGATCAATGACTGGGTCAGCCTACAAGAGAGCTTTGACAAAATAAATAAGCAGCCTGAGAAAGTCATGCGGGTTATAGAATCTGACAAAGTTCCTACCCTTTACATTAAGGCACTTGTGATGTTGGAGGACTTTTTGAGTCGGGCTTTGGCAAATAAGGACGCCAAGAAGAAGATGAGTAGTAGCAATGCCCAGGCCCTGAACTCAATGAAATAG 252 0.4206 MSTTIDQTKNAMKINDWVSLQESFDKINKQPEKVMRVIESDKVPTLYIKALVMLEDFLSRALANKDAKKKMSSSNAQALNSMK* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0066 83 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 83 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Vvi16g0066 83 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 1 83 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0066 Vvi-Chr16 627483 627734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0066 1 82 Eukaryotic Initiation Factors Gene Family AT3G56150 76.829 1.59e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0066 K03252 - vvi:100252123 148.288