Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0061 ATGATCCTAAATTTTTTAGAAATGATTTTTATGGCAGAATGTTGGGAGGAGGTGTTGCAGGTGCGCAAAGATCAGGAAGGGATTATGCTTCCACACATAAGAGCCAGACAGCAGTTAAAGCAACAAATTCGAAGCAAACAACAAGAAGACAACAGCAACCCGGGTTCATCTTCCTCCTTATCTGAATATGTCTTGTCGTATGTGGACACTTTGCTGGATCTGCAACTGCCGGAAGAGGAGAGTAAGCTTAACGAAGGAGAGATGGTTAGTTTGTGCGCGGAGTTTCTCAGTGGCGGGACTGAAACTACATCCACTGCACTGCAGTGGATCATGGCAAACCTGGTGAAGCACCCGCATATTCAATCCAAGATTTTTGAGGAGATTAGTGGAGTTGTGGAGGAAGGAAGACAGGAGGTGAGGGAGGAAGATTTGCAGAAGATGCCATACTTGAAGGCGGTGATACTGGAATGCCTGAGGCGTCATCCTCCGTTGCACTTTCTGTTGCCTCATTCAGTGACCCGAGATGTGACCTTGGGAGGGTTTGTGATACCAAAAGACACTGTAGTGAATTTCATGGTAGCAGACGTAGGTTGGAACCCAAGGACTTGGGAAGACCCAGTGGCATACAAACCGGAGAGGTTCATGAACAAGGAAGGCAATGGAGTGGAAGCATTTGATGTAACTGGGAGGAAGGAGATCAAAATGATTCCATTTGGTGCTGGAAGGAGAATTTGTCCAGAGTATGACCTAGCCATTTTCCATTTGGAGTACTTTGTAGCCAATTTGGTGTTAAATTTTGAAAGGAGAGCTGTGGATGGGGAGGAAGTTGATCTATCAGAGAAGCAGGAGTTGACAATAGTGATGAAGAACCCCTTGCAGGTTCACTTATCTCCTAGATGGAAGTAA 906 0.457 MILNFLEMIFMAECWEEVLQVRKDQEGIMLPHIRARQQLKQQIRSKQQEDNSNPGSSSSLSEYVLSYVDTLLDLQLPEEESKLNEGEMVSLCAEFLSGGTETTSTALQWIMANLVKHPHIQSKIFEEISGVVEEGRQEVREEDLQKMPYLKAVILECLRRHPPLHFLLPHSVTRDVTLGGFVIPKDTVVNFMVADVGWNPRTWEDPVAYKPERFMNKEGNGVEAFDVTGRKEIKMIPFGAGRRICPEYDLAIFHLEYFVANLVLNFERRAVDGEEVDLSEKQELTIVMKNPLQVHLSPRWK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0061 301 PRINTS E-class P450 group I signature 151 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS E-class P450 group I signature 87 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS E-class P450 group I signature 107 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS E-class P450 group I signature 245 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS E-class P450 group I signature 192 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS E-class P450 group I signature 235 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 Pfam Cytochrome P450 33 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 Gene3D Cytochrome P450 2 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS P450 superfamily signature 98 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS P450 superfamily signature 236 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PRINTS P450 superfamily signature 152 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0061 301 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 35 292 - -
Vvi16g0061 301 SUPERFAMILY Cytochrome P450 23 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0061 Vvi-Chr16 595582 596606 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0061 4 299 Cytochrome P450 AT1G64940 54.849 1.26e-113 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0061 K24184 - vvi:100244251 463.766