Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0058 ATGACCAGTGGTGCAGTACTGCAGGAAGAGCAAGTGAAGCTGTTAGGCTCATGGTATAGTCCATTTGTGAAAAGAGTAGAGTGGGCTCTCAAATTCAAAGGCATTGAATATGAGTATGTAGAAGAGGACTTGATTAACAAGAGCTCTCTTCTTCTCACCTCCAACCCAGTTTATAAGAAAGTCCCTGTGCTGCTTCATAATGGCAACCCCATTGCGCAAACGCTTGTTATCATAGAGTATATCGATGAGACTTGGAAGCATAACCCTATTTTGCCTCAAGACCCTCATGAGAGAGCCAAGGCTCGCTTTTGGGCTGATTTCATTGAAGTAAAGCTGACAGACGTGGTAAGAACAGCACTGATTACTCAAGGAGAGCAACAGGAGAAGGCAGTGAAGGAAGCAAAAGAAGCCATGGAAGTGCTTGAAGGAGAGGCAGCCAAGCTCAAGGGGGAGAGAGTATTCTTCGGAGGCAACAATGGTATAGGGTATGTCGACATTGTGCTAGGCTTGATGTGTGGTTGGGTGGAAGTCATTGAAGAAGTTGGAGGGTTCAAGTTGTTGGACCCTCAAAAGCAACCTCACATTCACAAATGGGTGGCCAACTTTGTGGAGTTGCCTCTCATCAAGCCAACCTTGCTGCCTAAGGAGAAATTGATGATTCACTTTCAAATGATTCGCCAAGCTTGTTTAGCTTTGGTTGCCAGGAAATGA 711 0.4543 MTSGAVLQEEQVKLLGSWYSPFVKRVEWALKFKGIEYEYVEEDLINKSSLLLTSNPVYKKVPVLLHNGNPIAQTLVIIEYIDETWKHNPILPQDPHERAKARFWADFIEVKLTDVVRTALITQGEQQEKAVKEAKEAMEVLEGEAAKLKGERVFFGGNNGIGYVDIVLGLMCGWVEVIEEVGGFKLLDPQKQPHIHKWVANFVELPLIKPTLLPKEKLMIHFQMIRQACLALVARK* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0058 236 CDD GST_N_Tau 12 85 - -
Vvi16g0058 236 Gene3D Glutaredoxin 6 90 - -
Vvi16g0058 236 FunFam Tau class glutathione S-transferase 91 232 - -
Vvi16g0058 236 Coils Coil 124 151 - -
Vvi16g0058 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 89 IPR004045 -
Vvi16g0058 236 SFLD Main.3: Omega- and Tau-like 8 230 IPR045073 -
Vvi16g0058 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 228 IPR010987 -
Vvi16g0058 236 CDD GST_C_Tau 95 223 IPR045074 GO:0004364|GO:0006749
Vvi16g0058 236 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 14 204 IPR045073 -
Vvi16g0058 236 SUPERFAMILY Thioredoxin-like 11 109 IPR036249 -
Vvi16g0058 236 SFLD Glutathione Transferase (cytosolic) 8 230 IPR040079 -
Vvi16g0058 236 SUPERFAMILY GST C-terminal domain-like 83 227 IPR036282 -
Vvi16g0058 236 Gene3D - 91 232 - -
Vvi16g0058 236 Pfam Glutathione S-transferase, C-terminal domain 125 206 IPR004046 -
Vvi16g0058 236 Pfam Glutathione S-transferase, N-terminal domain 11 83 IPR004045 -
Vvi16g0058 236 FunFam Tau class glutathione S-transferase 7 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0058 Vvi-Chr16 578446 579827 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0058 8 219 Glutathione S-transferase Gene Family AT3G09270 49.065 7.46e-64 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0058 K00799 - vvi:100242618 463.766