Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0053 ATGGCCAGTGGGGCGATGCAGGAAGAGCAAGTGAAGCTGTTGGGCATATGGGTAAGCCCATTTGTGAAAAGAGTAGAGTGGGCTCTCAAGTTCAAAGGCATAGAATATGAGTATGTGGAAGAAGACTTGACCAACAAGAGCTCTCTTCTCCTCACCTCCAACCCAGTTCACCAGAAAGTCCCTGTGCTGCTTCATAACGGCAACCCCATCGTTGAATCACTTGTTATCATAGAGTATATTGATGAGAATTGGAAGCAAAACCCCATTTTGCCTCAAGACCCTCATGAGAGAGCCAAGGCTCGCTTTTGGGCAAACTTCATTGAACAAAAGATAACAGAAGCTACAAGAACAGCATTAGTTACTGAAGGAGAGCAACAAGAGAAGGTAGTGAAGGAACTAAAAGAAGCCATGGAAGTGCTTGAAGGAGAGGCTGCAGCCAAGCTCAATGACAAGACATTATTCTTTGGAGGCAAAAATGGTCTTGGGTATGTGGACATTGTGCTAGGTTGGATATGTAATTGGGTGGAAGTCATTGAAGAAGTTGGAGGGTTCAAGGTTTTGGACCCTCAAAAGCAACCACACATTCACAAATGGATGGCCAACTTTGTGGAGGTGCCTCTCATCAAGCCAACCTTGCTGCCCAAGGAGAAGATGGTGGTGTACTTTCAAATGGTTCGCCAAGCTTATTTAGGTTTGGCTGCCAAGAAATGA 711 0.4529 MASGAMQEEQVKLLGIWVSPFVKRVEWALKFKGIEYEYVEEDLTNKSSLLLTSNPVHQKVPVLLHNGNPIVESLVIIEYIDENWKQNPILPQDPHERAKARFWANFIEQKITEATRTALVTEGEQQEKVVKELKEAMEVLEGEAAAKLNDKTLFFGGKNGLGYVDIVLGWICNWVEVIEEVGGFKVLDPQKQPHIHKWMANFVEVPLIKPTLLPKEKMVVYFQMVRQAYLGLAAKK* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0053 236 SFLD Main (cytGST) 6 230 - -
Vvi16g0053 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 9 88 IPR004045 -
Vvi16g0053 236 Gene3D - 90 232 - -
Vvi16g0053 236 Pfam Glutathione S-transferase, N-terminal domain 10 82 IPR004045 -
Vvi16g0053 236 Coils Coil 123 150 - -
Vvi16g0053 236 FunFam Tau class glutathione S-transferase 6 92 - -
Vvi16g0053 236 CDD GST_C_Tau 94 223 IPR045074 GO:0004364|GO:0006749
Vvi16g0053 236 Gene3D Glutaredoxin 4 89 - -
Vvi16g0053 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 222 IPR010987 -
Vvi16g0053 236 FunFam Tau class glutathione S-transferase 90 232 - -
Vvi16g0053 236 SUPERFAMILY GST C-terminal domain-like 82 228 IPR036282 -
Vvi16g0053 236 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 205 IPR045073 -
Vvi16g0053 236 SFLD Main.3: Omega- and Tau-like 6 230 IPR045073 -
Vvi16g0053 236 SUPERFAMILY Thioredoxin-like 10 110 IPR036249 -
Vvi16g0053 236 Pfam Glutathione S-transferase, C-terminal domain 116 204 IPR004046 -
Vvi16g0053 236 CDD GST_N_Tau 11 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0053 Vvi-Chr16 535089 537086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0053 7 223 Glutathione S-transferase Gene Family AT2G29420 46.083 4.03e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0053 K00799 - vvi:100259640 465.307