Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0048 ATGGAGATATGGGTCTTCTTCTTCATCGCCTCACTCTGTATTGCTTCCCTCCTCAAATCTCTCCATGATTTCTTCTTCCCAAAGCTCAAACTCCCACCAGGACCCGCCGCCTTTCCTCTCATCGGAAGCCTCCTCTGGCTCGGCACATCCTTCGCCGACCTCGAACCCACCCTCCGAAATTTACACGCCAAGTACGGCCCAATCCTCACTCTCCGAATCGGCTCTCGCCCGGCCATCTTCATCTCCGAGAACTCCCTCGCCCACCAGGCCTTGGTGCAAAACGGAGCCGTTTTCTCCGACCGTCCTGAGGCGCGTCCGGCCGGTAGAGTCATGAATAGTAACCAGCGAAACATCAGTTCGTGCCCCTATGGCCCGACCTGGCGTCTCTTCCGCCGCAACCTCATGGCCGAGATTCTCCACCCTTCCCGGGTGAGAAGCTACTCCCACGCACGAAAGTGGGTGCTGGAGATTCTGGTCTCTCGGCTTAGAAGCCACTCCGACGGATTTGTCCCTGTCCGAGTGATGGATCACGTTCAATACGCCATGTTTTGCCTACTGGTGTTCATGTGTTTCGGGGACAAGCTCGAGGAGAAGCAAATTCAGGAGATTGAGATGATGCAGCGAAGGTGCTTGTTGGAATTCCGTCGATTCAATAGGCTAGATTTGTTGCCGAGGATAGGGAAGGTATTATTTCGAAAAACGTGGGACGAGTTGCTCAATTTGCGCAAAGATCAAGAAGAGATTCTGCTGCCGCACATAAGAGCCAGACAGCCGCTAAAGCAGGAAACGCAAAGCAAACGAGAAGAAGACAACAGCGACCCGGGTTCATCTTCATCCTCAAAGGACTATGTCTTGTCGTACGTCGATACTTTGTTGGATCTGCAGTTGCCGGAGGAGAAGAGGAAGCTTAATGAAGGAGAGATAGTGACGCTGTGCTCGGAGTTTCTCAGTGCCGGAACTGACACTACCTCCACTGCACTGCAGTGGATCATGGCCAACCTGGTGAAGTCCCCCCATATTCAGGCCAGGCTTTTCGAGGAGATTAGTGGGGTTGTGGGGGAAGGAGAGGAGGAGGTGAAGGAGGAGGATTTGCAGAAGATGCCATACTTGAAGGCAGTGGTCTTGGAAGGTCTGAGGCGGCATCCTCCGGGACACTTTGTGTTGCCTCATTCAGTGACCGAAGATGTAAGCTTTGAAGGGTATGACATACCCAAGAACGCAACTGTGAATTTCATAGTATCAGAGCTGAATTGGAATCCAAAGATTTGGGAAAACCCAATGGAGTTCAAGCCAGAGAGGTTCTTGGACATCAATGGAGATGGAGATCATGGAGATGAAGGGGAAGCATTTGATATAACTGGGAGCAGAGAGATAAAGATGATGCCATTTGGTGCAGGGAGGAGGATATGTCCCGGGTATGGGTTGGCAATGCTGCATTTGGAGTATTTTGTGGCGAATTTGGTGTGGAATTTTGACTGGAAAGCAGTGGAGGGAGATGAAGTTGATCTATCGGAGAAGCTGGAGTTCACAGTAGTGATGAAGAATCCATTGCAGGCCCACTTATCTCCGAGGTTGAAATAA 1581 0.5123 MEIWVFFFIASLCIASLLKSLHDFFFPKLKLPPGPAAFPLIGSLLWLGTSFADLEPTLRNLHAKYGPILTLRIGSRPAIFISENSLAHQALVQNGAVFSDRPEARPAGRVMNSNQRNISSCPYGPTWRLFRRNLMAEILHPSRVRSYSHARKWVLEILVSRLRSHSDGFVPVRVMDHVQYAMFCLLVFMCFGDKLEEKQIQEIEMMQRRCLLEFRRFNRLDLLPRIGKVLFRKTWDELLNLRKDQEEILLPHIRARQPLKQETQSKREEDNSDPGSSSSSKDYVLSYVDTLLDLQLPEEKRKLNEGEIVTLCSEFLSAGTDTTSTALQWIMANLVKSPHIQARLFEEISGVVGEGEEEVKEEDLQKMPYLKAVVLEGLRRHPPGHFVLPHSVTEDVSFEGYDIPKNATVNFIVSELNWNPKIWENPMEFKPERFLDINGDGDHGDEGEAFDITGSREIKMMPFGAGRRICPGYGLAMLHLEYFVANLVWNFDWKAVEGDEVDLSEKLEFTVVMKNPLQAHLSPRLK* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0048 526 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 MobiDBLite consensus disorder prediction 259 281 - -
Vvi16g0048 526 CDD CYP77_89 64 518 - -
Vvi16g0048 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 517 - -
Vvi16g0048 526 Gene3D Cytochrome P450 27 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vvi16g0048 526 MobiDBLite consensus disorder prediction 259 275 - -
Vvi16g0048 526 SUPERFAMILY Cytochrome P450 32 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0048 526 FunFam Cytochrome P450 family protein 26 526 - -
Vvi16g0048 526 Pfam Cytochrome P450 32 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0048 Vvi-Chr16 494884 496464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0048 1 524 Cytochrome P450 AT1G64940 60.531 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0048 K24184 - vvi:100264821 1021.15