LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi16g0045	ATGGAGAAGTGGTTCTTCATCATCGTCTCCCTCTGTGTTGCGGCTCTTCTCAAGGCTCTCTATGATCTTGTCTTCCCAAGAAACAGGCTCCCTCCGGGACCCATTACAGTTCCATTCATTGGAAACTTTCTATGGCTTCGGAAATCATTCTCAGAACTCGAATCCGTCCTTCCAGATCTACACGCTAAGTATGGCCCCATCATCACCCTCCGAATGGGCTCTCGCCCGACCATCTTCATCTCCACCAAATCTCTTGTCCACCAAGCCCTAGTCCAGAACGGCGCGGTCTTCGCCGACCGCCCTCCCGCACCGCTCACCCACAGAGTTATCAGTTGCAACCAGCAGAACATCAGCGCCGGGGTCTATGGCCCGAACTGGCGCCTCTTTCGCCGCAACCTTACCTACGAAATCCTCAGTCCCTTGCGCGTCAAATCGTATTCTCGCGCACGCAAGTGGGTCTTGGACATTCTCCTCTCTCGCCTTCAAAACCATTCCGGACCCATCCCTGTGTTTGATCACTTCGGATACGCCATGTTTTGCTTACTGGTTCTTATGTGCTTCGGGGACAAGCTTGGAGAGAAGCAGATTCAAGAGATTGAAGTGGTTGAGAGGAAAGTTTTGTTCAGCTATGCTCGCTTCAATTCGCTTAATTTCTGGGGTAGATTGGGGAAAATTTTGTTCAAAAAGCGTTGGGAGGAGTTGCTACAGCTTCGCAAGGATCAGGAGGCCGTACTGATTCCCCTCATCAAAGCCAGACAACAGCTAAAGCAAGAAATGCAAGGAAAACAAGGGCAATCAGAGGACTATGTCTTGTCGTATGCTGACACTTTGCTAGACCTGCAACTGCCGGAAGAGAACCGGAAGCTTACCTATGGAGAGATAGTTAGTTTGTGCTCGGAGTTTCTCAACGCTGCAACTCATTCGACAAGCACTACAGTGCAGTGGATTATGGCGAATCTGGTGAAATACCCGCATATTCAAGCCAAGGTGTATGAAGAGATTAGTGGGGTTGTGAAGGATGGAGCGGAAATGGTAAGGGAGGAAGATTTGCAGAAGATGCCATACTTAAAGGCCGTGATTTTGGAAGGTCTGAGGCGTCATCCTCCAGGACACTTTGTGCTGCCTCATTCAGTGACCCAAGATACAGTCTTGGACGGTTACCTCATACCCAAAAATGCTACTGTGAATTTCAGGGTTATGGAGATCAGTCTAGACCCAAAAATATGGGAAGATCCAAAAGAGTTCAGGCCCGAGAGGTTCTTGAGCAGTAATGGTGGGGGAGAGAGAGAAGAAGCATTTGATATAACTGGGACTAGGGAGATTAAGATGATGCCATTTGGTGCAGGACGAAGGGTTTGCCCTGGGTATAATTTAGGGTTGCTGCATTTGGAGTATTATGTGGCCAATTTGGTATGGAAATTTGAATGGAAGGCTGTGGAAGGAGATGATATTGATCTATCAGAGAAGGAAGAGTTTGCAATAATGATGAAGAGCCCATTGCAGGCTCTCATATCTCCAAGATCGATGGGCACAAGGAGCAAGGTAACTGCAACATAA	1557	0.483	MEKWFFIIVSLCVAALLKALYDLVFPRNRLPPGPITVPFIGNFLWLRKSFSELESVLPDLHAKYGPIITLRMGSRPTIFISTKSLVHQALVQNGAVFADRPPAPLTHRVISCNQQNISAGVYGPNWRLFRRNLTYEILSPLRVKSYSRARKWVLDILLSRLQNHSGPIPVFDHFGYAMFCLLVLMCFGDKLGEKQIQEIEVVERKVLFSYARFNSLNFWGRLGKILFKKRWEELLQLRKDQEAVLIPLIKARQQLKQEMQGKQGQSEDYVLSYADTLLDLQLPEENRKLTYGEIVSLCSEFLNAATHSTSTTVQWIMANLVKYPHIQAKVYEEISGVVKDGAEMVREEDLQKMPYLKAVILEGLRRHPPGHFVLPHSVTQDTVLDGYLIPKNATVNFRVMEISLDPKIWEDPKEFRPERFLSSNGGGEREEAFDITGTREIKMMPFGAGRRVCPGYNLGLLHLEYYVANLVWKFEWKAVEGDDIDLSEKEEFAIMMKSPLQALISPRSMGTRSKVTAT*	519

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi16g0045	518	CDD	CYP77_89	63	501	-	-
	Vvi16g0045	518	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	12	499	-	-
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	398	422	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	443	453	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	357	375	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	453	476	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	293	310	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	85	106	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vvi16g0045	518	PRINTS	E-class P450 group I signature	313	339	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Showing 1 to 10 of 19 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi16g0045	Vvi-Chr16	479387	481071	Proximal

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi16g0045	1	507	Cytochrome P450	AT1G64940	56.647	0.0	603

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi16g0045	K24184		-	vvi:100252773	1026.16

Showing 1 to 1 of 1 entries