Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0043 ATGGAGACCTGGCTCGGGGTCCTCGTCTCTCTCTGCATTGCTGCTTTCTTCTTCCCATTGCTCTTCTCCATGCCCAAGAAGAAGCTCCCTCCTGGACCCTTTGCCTTTCCAATCATCAGCAGCTACCTATGGCTTCGGAAATCTTACACAGAACTTGAGCCAATCCTCAGAAACCTTCACGCTAAGCATGGTCCAATCGTCTCCCTCCCACTTGGCAACAGCCCAGCAATCTTCGTCGCGAGTGCCTCCCTGGCTCACGAAGCGTTAGTTCAAAACGCTGCAGTTTTCGCCCACCGCCCCGTTCCTCCGGTTACCAACAAAGTTATTGGCAGCAACCAGCACAACGTGAGCTCCGCCGGTTACGGTCCCACCTGGCGCCTCCTCCGCCGCAACCTCACTACAGAAATCCTCAACCCCTTGCGCCTAAAAGCGTACTCCCGAGCCCGCAAATGGGTGCTGGAGATTCTCTTCTCTCGGCTTCTCAGGAGCTCTGAAACCGGAGATGGGGTGGTACGCGTGGTGGATGACTTCCACTTCGCCATGTTTTGCTTGCTGGTTCTGATGTGCTTCGGGGATCAGCTTGAGGAGGAGAAGGTGAGAGAAATCGAAGCTGCTCAGCTGCGAGTTTTGGCCGGTTTTGGCACCTTCAATATGCTCAATTTCTGGCCTACCATAGGAAAGATCTTGTTTCGGAAGCGTTGGGAGAAGTTCCTGCAGCTACGCAAGCATCAAGAAAATGTGCTGATCCCTCTTATAAGGGCCAGAGAGCGCTTGAAGGAGGAATTACAAAGCAAACAACAAGAAGATTCCGACAATGAAGACAGCAGTCGTATAACTGTCTACGTTGATACTTTGCTGGATCTGCAACTGCCTGACGAGAAGAGGAAGCTCAATGACAGCGAACTGGTTAGTTTGTGCTCCGAGTTTCTCAACGCAGGGACACATACTACTTACACATCGCTGCAGTGGATCATGGCAAACCTGGTGAAGTACCCGCATATTCAGGCCAAGGTCTTTGAAGAGATTAGTGGGGTTAAGGGCACAAGAGAGGACGAGGTGAAGCAGGAAGATTTGCAGAAGATGCCATACTTGAAGGCTGTGATCTTGGAAGGTTTGAGGCGTCATCCTCCTGGACACTTCGGCTTGCCTCATGCAGTGGACCAAGATGTAAATCTGGGTGGCTATACAATCCCCCAAAACGCTAACATCTTTTTCATGGTAGCAGAGATCGCATGGAACCCTGAAGTGTGGGAAGATCCACTGGAGTTCAAGCCAGAGAGGTTCTTGACTGGAGATGGGGTAGAAGCATTCGATGTGACTGGGAGCAAGGAGATCAAAATGATGCCATTCGGTGCAGGAAGGAGGGTTTGCCCTGGTAATGGTTTAGGAATTTTTCATTTGGAGTACTTTGTGGCCAATTTGATTTGGAAGTTCAAATGGACTGCTGTGGATGGAGATGATGTTGATCTCTCTGAGAAAAAAGTTTCAGCCCTTCTGCCAGTGCTGATGCAGAATCCATTGAAGGCTCACATCTCTCCAAGGGCCAAATGA 1551 0.5048 METWLGVLVSLCIAAFFFPLLFSMPKKKLPPGPFAFPIISSYLWLRKSYTELEPILRNLHAKHGPIVSLPLGNSPAIFVASASLAHEALVQNAAVFAHRPVPPVTNKVIGSNQHNVSSAGYGPTWRLLRRNLTTEILNPLRLKAYSRARKWVLEILFSRLLRSSETGDGVVRVVDDFHFAMFCLLVLMCFGDQLEEEKVREIEAAQLRVLAGFGTFNMLNFWPTIGKILFRKRWEKFLQLRKHQENVLIPLIRARERLKEELQSKQQEDSDNEDSSRITVYVDTLLDLQLPDEKRKLNDSELVSLCSEFLNAGTHTTYTSLQWIMANLVKYPHIQAKVFEEISGVKGTREDEVKQEDLQKMPYLKAVILEGLRRHPPGHFGLPHAVDQDVNLGGYTIPQNANIFFMVAEIAWNPEVWEDPLEFKPERFLTGDGVEAFDVTGSKEIKMMPFGAGRRVCPGNGLGIFHLEYFVANLIWKFKWTAVDGDDVDLSEKKVSALLPVLMQNPLKAHISPRAK* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0043 516 CDD CYP77_89 62 508 - -
Vvi16g0043 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 501 - -
Vvi16g0043 516 SUPERFAMILY Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Vvi16g0043 516 Gene3D Cytochrome P450 23 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 FunFam Cytochrome P450 family protein 23 516 - -
Vvi16g0043 516 Pfam Cytochrome P450 30 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 Coils Coil 255 275 - -
Vvi16g0043 516 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0043 516 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0043 Vvi-Chr16 455290 456840 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0043 1 514 Cytochrome P450 AT1G64940 54.633 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0043 K24184 - vvi:100244230 1045.42