Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0041 ATGGAGGAGATATGGTGGTTTGTTTTCGTATTTTTTGCATCTCTTTTATTTGCGAGGTCTAAGTTCAAGTTCCGGTCTAAGTCCAATCTCCCTCCAGGGCCAAGTACATTTCCGATTATTGGAAATTTATTATGGTTACAAAAATCCTTTTCAGAACTCGAGTATGTGGTAAAGAGCCTGCATGAAAAGCATGGTCCGATCGTGACCCTCCCCTTCGGGTTTAACCCGGCCATCTTTGTGGCTAGTAACTCCTTGGCTTACCAAGCTCTAGTCCAGAACGGAGCCGTTTTTGCCGACCGCCCTCCCCCACCCATCACCAGCAAGATCATGGCCAGCAACCAGTGCACCATCAGCTCCGCCCCCTACGGCCCCGCCTGGCGCCTCCTCCGCCGCAATCTCACCTCCGAGATCCTCCACCCCTCGCGCGTGAGGCTATACTCCCGCGCCCGGAAGTGGGTCCTGGACATTCTCGTGGCCGGCCTCCGCCAGGAGGCCGAAGGCCGGGACAACGTGGTTTTAGTGGTGAAGCACTTCCACTTCGCCATGTTCTGCTTGCTGGTTCTCATGTGCTTCGGCGACGACCTTGGGGAAGCCAAGATCAGAGAGATTCAAGGCATGGAGAGTCGAGTCCTTCAGAGTTATCACAACTTTAAAATCCTCAATTTCTTCCCGGTTATCGGAAAATTCTTGTTCCACAAGCGGTGGGAGAAGTTCATGCAGCTGAGGAAGGATCATGAGGACGTGCTCATCCCTCTGATTAGAGCTCGGCAACCCTGCGAGAAGACGGATACGGTGAGCAAACCAAATCCATCCATAACGTGCTACGTCGACACTTTACTGGACCTGCAACTCCCAGACGAGAAGAGGAAGCTCACAGAAGGGGAGATAGTGAGCTTGTGCTCGGAGTTTCTCAACGCCGGCACCCACACCACAGACGCTCCGCTGCAGTGGATCATGGCGAACCTGGTGAGGTACCCGCACATTCAGGCCAAGCTTTTCGAGGAAATTAGCGGGGTTGTGGGGGAAGGAGAGGACGAAGTGAAGGAGGAAGATTTGCAGAAGATGCCATACTTGAAGGCGGTGGTGTTAGAGGGTCTCCGGCGGCACACTCCGGCCCACTTTCTTGTACCGCATGCAGTGACCAAAGACGTGATATTAGATGGGTATGTGATCCCAAAGGACGCCAAAGTATTCTTCATGGCAGCTGAAATGGCGTGCAACCCCAAGGTGTGGGAAGACCCAATGGAGTTCAAACCGGAGAGGTTCTTGGACAGCAATAACAATGGTGAAACATTTGATATAACTGGTAGCAGAGAGATAAAGATGATGCCGTTTGGTGCAGGAAGGAGGATATGTCCAGGGTATGGTTTAGGTATGCTGCATTTGGAGTATTTTGTGGCGAATTTGGTGTGGAAATTTGAATGGAAGGCTGTGGGTGAAGACGGAGTTGATCTTTCAGAAAGGCCTCTTGTGTCTCTGCTACCAACCACCATGAAGAACCCGTTGCAAGCTCGCATTTCTCCAAGGTTATCAGCCAGGACTGCAATGGAGTAA 1554 0.518 MEEIWWFVFVFFASLLFARSKFKFRSKSNLPPGPSTFPIIGNLLWLQKSFSELEYVVKSLHEKHGPIVTLPFGFNPAIFVASNSLAYQALVQNGAVFADRPPPPITSKIMASNQCTISSAPYGPAWRLLRRNLTSEILHPSRVRLYSRARKWVLDILVAGLRQEAEGRDNVVLVVKHFHFAMFCLLVLMCFGDDLGEAKIREIQGMESRVLQSYHNFKILNFFPVIGKFLFHKRWEKFMQLRKDHEDVLIPLIRARQPCEKTDTVSKPNPSITCYVDTLLDLQLPDEKRKLTEGEIVSLCSEFLNAGTHTTDAPLQWIMANLVRYPHIQAKLFEEISGVVGEGEDEVKEEDLQKMPYLKAVVLEGLRRHTPAHFLVPHAVTKDVILDGYVIPKDAKVFFMAAEMACNPKVWEDPMEFKPERFLDSNNNGETFDITGSREIKMMPFGAGRRICPGYGLGMLHLEYFVANLVWKFEWKAVGEDGVDLSERPLVSLLPTTMKNPLQARISPRLSARTAME* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0041 517 Pfam Cytochrome P450 31 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 FunFam Cytochrome P450 family protein 24 511 - -
Vvi16g0041 517 Gene3D Cytochrome P450 23 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vvi16g0041 517 CDD CYP77_89 63 503 - -
Vvi16g0041 517 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0041 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 501 - -
Vvi16g0041 517 SUPERFAMILY Cytochrome P450 31 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0041 Vvi-Chr16 439624 441177 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0041 3 511 Cytochrome P450 AT1G64940 55.299 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0041 K24184 - vvi:100257926 1028.47