Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0039 ATGGTAGCAGAGATCGCATGGAACCCTGAAGTATGGGAAGATCCACTGGAGTTCAAGCCAGAGAGGTTCTTGACTGGAGATGGGGTAGAAGCATTCGATGTGACTAGGAGTAAGGAGATCAAAATGATGCCATTTGATGCAGGAAGGAGGGTTTGCCCTGGTAATGGTTTAGGAATTTTTCGTTTGGAGTACTTTGTAGCCAATTAG 207 0.4541 MVAEIAWNPEVWEDPLEFKPERFLTGDGVEAFDVTRSKEIKMMPFDAGRRVCPGNGLGIFRLEYFVAN* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0039 68 Gene3D Cytochrome P450 1 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0039 68 SUPERFAMILY Cytochrome P450 5 67 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0039 68 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 68 - -
Vvi16g0039 68 Pfam Cytochrome P450 6 67 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0039 68 PRINTS E-class P450 group I signature 1 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0039 68 PRINTS E-class P450 group I signature 52 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0039 68 PRINTS E-class P450 group I signature 42 52 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0039 Vvi-Chr16 430545 430751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0039 1 68 Cytochrome P450 AT3G03470 58.824 5.06e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0039 K24184 - vvi:100244230 139.043