Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0038 ATGCCAGTCCTGTTAATCAATTTCCTGTTCCACGAAGACAAAAAACAAACAAACAAAAAAGAAAAAAATAGAAGCTTCCGTATTTGGTCACCGACCCTCCCACGTGAATTGAATTCAACTTCTTTCAAGTCCCGGTCCAAGTCCAAGTCCAATCTCCCTCCAGGGCCAAGTACATTTCCGATCATCGGAAATTTATTATGGTTGCGAAAATCTTTTTCAGAACTCGAGTATGTGGTAAAGACTCTGCATGAAAAGCATGGTCCGATTGTGAGCCTCCCCTTCGGGTTTAACCCGGCCATCTTTGTGGCTAGTAACTCCTTGGCTTACCAAGCTCTAGTCCAAAACGGAGCCGTTTTTGCCGACCGCCCTCCCCTACCCATCACCAGCAAGATCATGGCCAGCAGCCAGTGCACCATAAGCTCCGCCCCCTACGGCCCTGCCTGGCGCCTCCTCCGCCGCAATCTCACCTCCGAGATCCTCCACCCCTCGCGCGTGAGGCTATACTCCCGCGCCCGGAAGTGGGTCCTGGACATTCTCGTCGCCGGCCTCCGTGAGGAGGCCGAAGGCCGGGACAACGTGGTTTTAGTGGTGAAGCACTTCCACTTCGCCATGTTCTGCTTGCTGGTTCTCATGTGCTTCGGCGACGACCTTGGGGAAGCCAAGATCAGAGAGATTCAAGGCATGGAGAGTCGAGTCCTTCAGAGTTATCACAACTTTAAAATCCTCAATTTCTTCCCGGCTATCGGAAAATTCTTGTTCCACAAGCGGTGGGAGAAGTTCATGCAGCTGAGGAAGGATCATGAGGACGTGCTCATCCCTCTGATTAGAGCTCGGCAACCCTGCAAGAAGACGGAAACGGTGAGCAAACCAAATCCATCCATAACGTGCTACGTCGACACTTTACTGGACCTGCAACTCCCGGACGAGAAGAGGAAGCTCACAGAAGGGGAGATGGTAAGCTTGTGCTCGGAGTTTCTCAACGCCGGCACCCACACCACGGACGCTCCGCTGCAGTGGATCATGGCGAACCTGGTGAAGTACCCGCACATTCAGGCCAAGCTTTTCGAGGAAATTAGCGGGGTTGTGGGGGAAGGAGAGGACGAAGTGAAGGAGGAAGATTTGCAGAAGATGCCATACTTGAAGGCGGTGGTGTTAGAGGGTCTCCGGCGGCACACTCCGGCCCACTTTCTGGTACCGCATGCAGTGACCAAAGACGTGATATTAGATGGGTATGTGATCCCAAAGGACGCCAAAGTATTCTTCATGGCAGCTGAAATGGCGTGCAATCCCGAGGTGTGGGAAGACCCAATGGAGTTCAAGCCGGAGAGGTTCTTGAACAGCAATAATAATGGTGAAACATTTGATATAACTGGTAGCAGAGAGATAAAGATGATGCCTTTTGGTGCAGGGAGGAGGATATGTCCAGGGTATGGTTTAGGTTTGCTGCATTTGGAGTATTTTGTGGCGAACTTGGTGTGGAAATTTGAATGGAAGGCTGTGGGTGAAGACGGAGTTGATCTTTCAGAAAGGCCTCTTGTGTCTCTGCTACCAACCACCATGAAGAACCCGTTGCAGGCTCGCATTTCTCCAAGGTTATCAGCCAGGACTGCAATGGAGTAA 1620 0.5142 MPVLLINFLFHEDKKQTNKKEKNRSFRIWSPTLPRELNSTSFKSRSKSKSNLPPGPSTFPIIGNLLWLRKSFSELEYVVKTLHEKHGPIVSLPFGFNPAIFVASNSLAYQALVQNGAVFADRPPLPITSKIMASSQCTISSAPYGPAWRLLRRNLTSEILHPSRVRLYSRARKWVLDILVAGLREEAEGRDNVVLVVKHFHFAMFCLLVLMCFGDDLGEAKIREIQGMESRVLQSYHNFKILNFFPAIGKFLFHKRWEKFMQLRKDHEDVLIPLIRARQPCKKTETVSKPNPSITCYVDTLLDLQLPDEKRKLTEGEMVSLCSEFLNAGTHTTDAPLQWIMANLVKYPHIQAKLFEEISGVVGEGEDEVKEEDLQKMPYLKAVVLEGLRRHTPAHFLVPHAVTKDVILDGYVIPKDAKVFFMAAEMACNPEVWEDPMEFKPERFLNSNNNGETFDITGSREIKMMPFGAGRRICPGYGLGLLHLEYFVANLVWKFEWKAVGEDGVDLSERPLVSLLPTTMKNPLQARISPRLSARTAME* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0038 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Vvi16g0038 539 Pfam Cytochrome P450 53 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 Gene3D Cytochrome P450 45 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 SUPERFAMILY Cytochrome P450 53 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g0038 539 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 46 523 - -
Vvi16g0038 539 CDD CYP77_89 85 525 - -
Vvi16g0038 539 FunFam Cytochrome P450 family protein 46 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g0038 Vvi-Chr16 401533 403348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0038 37 533 Cytochrome P450 AT1G64940 55.357 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0038 K24184 - vvi:100242511 1002.66