Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g0033 ATGGATGAGTATCAAGAGATGGAGAGCTTTGGCATGGACAACGACTTCGAAGACGGTCAATGGATCAACGGCGAATTCTACTACCGTAAGCGCAGGGACAAGCGCCACCAGACCAAAGACGACGTCCTCTATGGTGTATTCGCCGACTCCGATTCCGACGACTCTTCCTCTGCCAAGAAGCGCCGTAAGGACCTCTCCAACAAGACCGATTTCACCAAGCCCGTCAATTTCGTCTCCACCGGCGTCGTCATGCCCACCCAAGAAATCGAACGTAATTCCAGGGAGCAAGTCAACGAAGACGACGGCGGCAGCGGCGGCGACAGGCCCGGTTTGGGCCTCGGTTCTACCAATTTCGGTTCAGGTATAGGCTTTACTTCCAATTCCGGTTCGTTTTCGAAAAATGTTGGCAATAACGAAGTAGATGAACATGATAACGATGATGATGGTTTCCTTCCCACTGCGTTCGGAAGGAAGATTAAGGAGGGTGCCCAGCGGCGGGAGAGAGAGAGGGAGAAGTCGAAATTAGTTAAGAAATCTCAAGGAGGGAGAAGAGAGGCTGAATTGGGGGATGTCGGACGATTTGAGAAGTTTACGAAAGGGATTGGGATGAAATTGATGGAGAAAATGGGTTACACAGGAGGTGGTCTGGGGAAAAATGAGCAAGGGATTGTTGCTCCGATTGAGGCTAAGTTACGACCCAAGAATATGGGGATGGGTTTTAACGATTACAAGGAGACGAAATTGCCTGCATTGCAAGAACCTGAGGAGAAGAAATCGTTGCCTGGGACCACGCAGGCTGTGAATAAGAGTAAAGGGAAGCTCTGGACGAAGCAAGCCAGCGGGAAGAAAAAGGACAGATACATTACAGCTGAGGAGTTGCTTGTGAAGAAGCAAGAGCAGGGTATTGAAGTTGTTCAGAAGGTGTTTGACATGAGGGGGCCCCAGGTTCGCGTTTTGACGAATCTGGAGGATTTGAATGCTGAGGAGAAAGCCAGGGAAAATGATATACCAATGCCTGAACTTCAGCATAATGTGAAGTTGATTGTGAACTTAGCTGAGCTTGATATACAGAAGTTGGACAGGGATTTGAGGAATGAGAGAGAGACAGTGGTGAGCTTGCAGATGGAGAAGGAGAAGTTACAAAAAGAGGCAGCTCATCAGAAGACACAGTTGGATAATACAGAACAAATAGTTAGTGTATTGGACATAATAAGTGAGGAGAATTCAGTAGGAAAATTGACATTGGATTCACTTGCAAAGTATTTTGGTGATTTACGAAGGAGATTTGCCGAAGATTACAAACTTTGTAATCTGTCATGCATTGCTTGCTCATTTGCTCTCCCTTTACTTATTAGAGTGTTCCAGGGATGGGATCCCCTTCAAAATCCATTGCATGGCTTGGAAGTGATGTCCTCATGGAAAAATCTATTGCAAGGAGGGGACGATATTTTTGATCTCTCTGATGTGGGATCACCTTATACACAGTTGGTTATGGAAGTTGTTTTACCTGCTGTAAGAATATCTGGAATCAACACTTGGCAAGCCAGGGACCCTGAACCGATGCTTCGCTTTTTGGAGTCATGGGAAAAATTGCTTCCTTCCTCAGTCCTTCAAACCATGCTTGACAACATTGTTTTGCCTAAATTATCTTCTGCTGTAGATGTGTGGGACCCACGTAGGGAAACCGTTCCAATCCATGTTTGGGTGCATCCATGGCTACCACTGTTGGGTCAGAAGTTGGAGAGTTTATATTGGAAGATATGTGATAAATTGGGCAATGCTCTTCAAGCATGGCATCCTAGTGATGGGTCTGCTTACACTATCCTGTCACCTTGGAAGACAGTTTTTGACTCTACAAGTTGGGAGAGACTTATGGTTCGATCAATAATTCCGAAATTGATGAATGTCCTGCAAGAATTTCAAGTAAACCCAGCAAGTCAGAACCTCGATCAGTTCCATTGGGTCATGTCTTGGGCTTCTGTAATTCCAATTCATCGCATGGTTGAATTGTTGGAACTTCATTTCTTCCCAAAGTGGCAGCAGGTTTTGTACCATTGGTTGTGTTCAGGCCCAAACTTTGAAGAGGTTACACAATGGTATTTGGGTTGGAAGGGACTCTTGCCCCAAGAACTTCTTGCCAATGAACAGATCCGCTATCAGCTTAATATTGGTCTTGACATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTGCGAGAGAACATTAGCTATCTTCGGGTGCTTGAACAACGGCAGTTTGAGGCTCAGCAGAAAGCAGCTGCAGATGCTCGACAGCAAGCTGCCGCGAGTCTGGGTGGCACAACCCAGATGGATGGCATTGGAGGTGTGCTTGAGATGAGTTTGAAAGAAGTTATTGAGGCACATGCACAACAGCATGAATTGCTGTTTAAGCCTAAACCTGGCAGAATGTATAATGGTCACCAGATATATGGCTTTGGTAACATAAGCATAATAGTGGACTCTCTAAATCAAAAGGTATTTGCCCAACATGAAGAAAGATGGTCCTTGGTAACCCTGGAGCAGTTGCTGGAGATGCACAAGAATTCTATTTTGAAGTGA 2592 0.4568 MDEYQEMESFGMDNDFEDGQWINGEFYYRKRRDKRHQTKDDVLYGVFADSDSDDSSSAKKRRKDLSNKTDFTKPVNFVSTGVVMPTQEIERNSREQVNEDDGGSGGDRPGLGLGSTNFGSGIGFTSNSGSFSKNVGNNEVDEHDNDDDGFLPTAFGRKIKEGAQRREREREKSKLVKKSQGGRREAELGDVGRFEKFTKGIGMKLMEKMGYTGGGLGKNEQGIVAPIEAKLRPKNMGMGFNDYKETKLPALQEPEEKKSLPGTTQAVNKSKGKLWTKQASGKKKDRYITAEELLVKKQEQGIEVVQKVFDMRGPQVRVLTNLEDLNAEEKARENDIPMPELQHNVKLIVNLAELDIQKLDRDLRNERETVVSLQMEKEKLQKEAAHQKTQLDNTEQIVSVLDIISEENSVGKLTLDSLAKYFGDLRRRFAEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPLHGLEVMSSWKNLLQGGDDIFDLSDVGSPYTQLVMEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLQTMLDNIVLPKLSSAVDVWDPRRETVPIHVWVHPWLPLLGQKLESLYWKICDKLGNALQAWHPSDGSAYTILSPWKTVFDSTSWERLMVRSIIPKLMNVLQEFQVNPASQNLDQFHWVMSWASVIPIHRMVELLELHFFPKWQQVLYHWLCSGPNFEEVTQWYLGWKGLLPQELLANEQIRYQLNIGLDMMNQAVEGMEVVQPGLRENISYLRVLEQRQFEAQQKAAADARQQAAASLGGTTQMDGIGGVLEMSLKEVIEAHAQQHELLFKPKPGRMYNGHQIYGFGNISIIVDSLNQKVFAQHEERWSLVTLEQLLEMHKNSILK* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g0033 863 PIRSF TFIP11 1 860 IPR024933 -
Vvi16g0033 863 MobiDBLite consensus disorder prediction 53 69 - -
Vvi16g0033 863 MobiDBLite consensus disorder prediction 70 91 - -
Vvi16g0033 863 MobiDBLite consensus disorder prediction 254 278 - -
Vvi16g0033 863 MobiDBLite consensus disorder prediction 258 275 - -
Vvi16g0033 863 ProSiteProfiles G-patch domain profile. 198 243 IPR000467 GO:0003676
Vvi16g0033 863 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 853 IPR045211 GO:0000390
Vvi16g0033 863 MobiDBLite consensus disorder prediction 133 187 - -
Vvi16g0033 863 MobiDBLite consensus disorder prediction 39 119 - -
Vvi16g0033 863 MobiDBLite consensus disorder prediction 147 187 - -
Vvi16g0033 863 Pfam G-patch domain 198 239 IPR000467 GO:0003676
Vvi16g0033 863 Coils Coil 349 397 - -
Vvi16g0033 863 SMART G-patch_5 196 241 IPR000467 GO:0003676
Vvi16g0033 863 Pfam Tuftelin interacting protein N terminal 6 99 IPR022159 -
Vvi16g0033 863 Pfam GC-rich sequence DNA-binding factor-like protein 415 683 IPR022783 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi16g0033 198 239 C2H2 Transcription Factor Family AT5G26610 45.238 7.53e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g0033 K13103 - vvi:100251031 1689.09